| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
Click here to switch to the map view.
The map label for this gene is 156937007
Identifier: 156937007
GI number: 156937007
Start: 187888
End: 188598
Strand: Direct
Name: 156937007
Synonym: Igni_0212
Alternate gene names: NA
Gene position: 187888-188598 (Clockwise)
Preceding gene: 156937001
Following gene: 156937011
Centisome position: 14.48
GC content: 58.93
Gene sequence:
>711_bases ATGAGCCTAAAGGTAATAGCTGGGCAGATTACGTACATCGAGCGACTTTATATATACCATTACGTGCCCGGCGCCCATGC GTTGTGGATCTCCTTGGACAGCTGGGAACCCCCAGAGAGCCCCCTGGAGTTCTTGAGGGGCGAGGGGAGGCAGCTCTCCG TTGAGGAGATAGTGAAGAGGGCGCTCAAGTACTCGACGAAGACCTTAGTCTTCGACGGGCCCCTCCCTTACGAGGTAGCG GAAGAGCTCTTGAGGAGGGGGTTCAGGGTGGCCGTGAGGTACGACGCCCCCCTCGAGCTCCCCAAGGGGGCGTCGTTGCT CATGCAAACCTCCTCCCCCGAGGACTTGAGGGCCCAATTGAAGGCCTATGACGACGTCCACTTGGAAGTTTACCCAACCA ACCTAGAGGCGCTCGAAGAGGCCCCTAAGGACTTGCCCGTACACCTCTTCTCGTGGCCGGACTACTTAAAGGTAGAGAAG ATGGGCTTTTACTACGTCTACAACCACACCCAGCCCTACCGGGAGGACACCAAGTGCCCTAGGTGCGGCACCCCGAACGC GGTGAGGGAGAACGACACGCTCTTGGGATGGGACGGGCCTAGGTGTAGGAGGTGCGGCTTCCGCTTACACTACCACGCAG AGGAAACGCCGGAGGTGCCTAGGGTCATACGCGAGTGGCTCTCTTGGCGCTTTTCCGTTCCAGTGCTTTGA
Upstream 100 bases:
>100_bases AGTCCCCGGGCATCACTATCTTTCTTTGTACCTCATTGCTCTGCTTGTTCACCCTTTAACCCCATAGGGGAGATGCGGCG GAGCTAAATATGGTGGTTGC
Downstream 100 bases:
>100_bases CCGCCTTTTCGAGCCACTGGCCCAGCTTGGTGCACGTCGCGGGGTCGAAGAAGTTCCCGGGACCGCAACGGTTGGCGTGG GGACAAGAGGTACAAGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSLKVIAGQITYIERLYIYHYVPGAHALWISLDSWEPPESPLEFLRGEGRQLSVEEIVKRALKYSTKTLVFDGPLPYEVA EELLRRGFRVAVRYDAPLELPKGASLLMQTSSPEDLRAQLKAYDDVHLEVYPTNLEALEEAPKDLPVHLFSWPDYLKVEK MGFYYVYNHTQPYREDTKCPRCGTPNAVRENDTLLGWDGPRCRRCGFRLHYHAEETPEVPRVIREWLSWRFSVPVL
Sequences:
>Translated_236_residues MSLKVIAGQITYIERLYIYHYVPGAHALWISLDSWEPPESPLEFLRGEGRQLSVEEIVKRALKYSTKTLVFDGPLPYEVA EELLRRGFRVAVRYDAPLELPKGASLLMQTSSPEDLRAQLKAYDDVHLEVYPTNLEALEEAPKDLPVHLFSWPDYLKVEK MGFYYVYNHTQPYREDTKCPRCGTPNAVRENDTLLGWDGPRCRRCGFRLHYHAEETPEVPRVIREWLSWRFSVPVL >Mature_235_residues SLKVIAGQITYIERLYIYHYVPGAHALWISLDSWEPPESPLEFLRGEGRQLSVEEIVKRALKYSTKTLVFDGPLPYEVAE ELLRRGFRVAVRYDAPLELPKGASLLMQTSSPEDLRAQLKAYDDVHLEVYPTNLEALEEAPKDLPVHLFSWPDYLKVEKM GFYYVYNHTQPYREDTKCPRCGTPNAVRENDTLLGWDGPRCRRCGFRLHYHAEETPEVPRVIREWLSWRFSVPVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27498; Mature: 27367
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKVIAGQITYIERLYIYHYVPGAHALWISLDSWEPPESPLEFLRGEGRQLSVEEIVKR CCEEEEEHHHHHHEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCEECHHHHHHH ALKYSTKTLVFDGPLPYEVAEELLRRGFRVAVRYDAPLELPKGASLLMQTSSPEDLRAQL HHHCCCEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHH KAYDDVHLEVYPTNLEALEEAPKDLPVHLFSWPDYLKVEKMGFYYVYNHTQPYREDTKCP HHCCCEEEEEEECCHHHHHCCCCCCCEEEECCCCCEEEEECEEEEEECCCCCCCCCCCCC RCGTPNAVRENDTLLGWDGPRCRRCGFRLHYHAEETPEVPRVIREWLSWRFSVPVL CCCCCCCCCCCCEEEECCCCHHHHCCEEEEECCCCCCHHHHHHHHHHCCEECCCCC >Mature Secondary Structure SLKVIAGQITYIERLYIYHYVPGAHALWISLDSWEPPESPLEFLRGEGRQLSVEEIVKR CEEEEEHHHHHHEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCEECHHHHHHH ALKYSTKTLVFDGPLPYEVAEELLRRGFRVAVRYDAPLELPKGASLLMQTSSPEDLRAQL HHHCCCEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHH KAYDDVHLEVYPTNLEALEEAPKDLPVHLFSWPDYLKVEKMGFYYVYNHTQPYREDTKCP HHCCCEEEEEEECCHHHHHCCCCCCCEEEECCCCCEEEEECEEEEEECCCCCCCCCCCCC RCGTPNAVRENDTLLGWDGPRCRRCGFRLHYHAEETPEVPRVIREWLSWRFSVPVL CCCCCCCCCCCCEEEECCCCHHHHCCEEEEECCCCCCHHHHHHHHHHCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA