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The map label for this gene is 156936988

Identifier: 156936988

GI number: 156936988

Start: 169800

End: 170174

Strand: Direct

Name: 156936988

Synonym: Igni_0193

Alternate gene names: NA

Gene position: 169800-170174 (Clockwise)

Preceding gene: 156936987

Following gene: 156936989

Centisome position: 13.09

GC content: 54.93

Gene sequence:

>375_bases
GTGGGGAGGGTGAACAAGCCTCTCAGCGCCATAGAGAAGAGGCAGATGAAGCAACTGCTAAGGGAACTGCGCCAAAAGAT
GATTGAAGAGAGGAAGGAAAAGAGGGGCGTGACCCTTCGAGTGGTAGCGGAGGCCAATGTCGTTGACCAGGCTCAGAAGG
CGATCAGAGGGATGAAGTACGTCACTCCCACTATACTCGCGGAGAAGATGGGCATCAGCGTAGGGCTGGCCAAGAGAGTG
CTGAGGGACTTAGAGACCAGAGGCGTGCTCAAGCTCTACGCTAAGAACAGGAGGGTGCAAGTTTACGTCCCCAGCGACAA
GTTCGAACAGCTGGTCAAGCCGGGCGCATACAGCTACACAGTAAAGGAGATGTGA

Upstream 100 bases:

>100_bases
TACGGCGGGCTGCCGCCGAGATGGCGTTGGTAAGCCGGTTAATAAGTTTTTGGCACTGTAGAATTAAAGTTCTGCTGAAG
CACCCCACGGGGAGCGCGAC

Downstream 100 bases:

>100_bases
TCCCCACTCCGATGAGGTCCCTCGATCCCCCTGATTTTTATGATGAAGATTACGCGTCCCGAGGTGTAACGAACATGATG
GTTCCAGTGGACTTCTGGGA

Product: SSU ribosomal protein S25E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MGRVNKPLSAIEKRQMKQLLRELRQKMIEERKEKRGVTLRVVAEANVVDQAQKAIRGMKYVTPTILAEKMGISVGLAKRV
LRDLETRGVLKLYAKNRRVQVYVPSDKFEQLVKPGAYSYTVKEM

Sequences:

>Translated_124_residues
MGRVNKPLSAIEKRQMKQLLRELRQKMIEERKEKRGVTLRVVAEANVVDQAQKAIRGMKYVTPTILAEKMGISVGLAKRV
LRDLETRGVLKLYAKNRRVQVYVPSDKFEQLVKPGAYSYTVKEM
>Mature_123_residues
GRVNKPLSAIEKRQMKQLLRELRQKMIEERKEKRGVTLRVVAEANVVDQAQKAIRGMKYVTPTILAEKMGISVGLAKRVL
RDLETRGVLKLYAKNRRVQVYVPSDKFEQLVKPGAYSYTVKEM

Specific function: Unknown

COG id: COG4901

COG function: function code J; Ribosomal protein S25

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14289; Mature: 14158

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVNKPLSAIEKRQMKQLLRELRQKMIEERKEKRGVTLRVVAEANVVDQAQKAIRGMKY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHH
VTPTILAEKMGISVGLAKRVLRDLETRGVLKLYAKNRRVQVYVPSDKFEQLVKPGAYSYT
HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHEECCCEEEEEECCHHHHHHHCCCCCCEE
VKEM
ECCC
>Mature Secondary Structure 
GRVNKPLSAIEKRQMKQLLRELRQKMIEERKEKRGVTLRVVAEANVVDQAQKAIRGMKY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHH
VTPTILAEKMGISVGLAKRVLRDLETRGVLKLYAKNRRVQVYVPSDKFEQLVKPGAYSYT
HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHEECCCEEEEEECCHHHHHHHCCCCCCEE
VKEM
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA