| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936984
Identifier: 156936984
GI number: 156936984
Start: 164523
End: 164762
Strand: Direct
Name: 156936984
Synonym: Igni_0189
Alternate gene names: NA
Gene position: 164523-164762 (Clockwise)
Preceding gene: 156936983
Following gene: 156936986
Centisome position: 12.68
GC content: 59.58
Gene sequence:
>240_bases ATGGCCAAGTACAAGGTCTGGATAGAAAACGAGAAGTGCATATCTGACGCCGTGTGTGCTCACTTGTGCCCCGACGTATT CGAGATGAACGAGGAGTACAAGGCCGTCATCGTGCCTCAGTACCGCACCGGCGACAACCCCGCCGAGGGCGTCATACCCG AGGAGCTGAAGGACTGCGCGGAGCAAGCGGCCGCCGCGTGCCCCGTCCAAATAATCCACGTCGAGCCGCTCCAAGAGTAA
Upstream 100 bases:
>100_bases CTTTGTTTCGGTGTCCGCCACACTCTTCATCGGCTCCCGAAGGCCTCCTCGCCGCAAGTAAAATAAACCGTACGTGCAGC TCCCTTCCGGTGAAAAGGGG
Downstream 100 bases:
>100_bases AGCCCGCTAGAACTTTTTCTTACTGAGTTCTTCCTTCTTCCTTATTGCCTCTTCCAACTCCCTGGCCAGAGACTTGGCTG CGGGCAAGCTGACCTCCAGC
Product: ferredoxin-like protein
Products: NA
Alternate protein names: 4Fe-4S Ferredoxin; Ferredoxin-Like Protein
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MAKYKVWIENEKCISDAVCAHLCPDVFEMNEEYKAVIVPQYRTGDNPAEGVIPEELKDCAEQAAAACPVQIIHVEPLQE
Sequences:
>Translated_79_residues MAKYKVWIENEKCISDAVCAHLCPDVFEMNEEYKAVIVPQYRTGDNPAEGVIPEELKDCAEQAAAACPVQIIHVEPLQE >Mature_78_residues AKYKVWIENEKCISDAVCAHLCPDVFEMNEEYKAVIVPQYRTGDNPAEGVIPEELKDCAEQAAAACPVQIIHVEPLQE
Specific function: Unknown
COG id: COG1141
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8833; Mature: 8702
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKYKVWIENEKCISDAVCAHLCPDVFEMNEEYKAVIVPQYRTGDNPAEGVIPEELKDCA CCCEEEEECCCHHHHHHHHHHHCHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH EQAAAACPVQIIHVEPLQE HHHHHCCCEEEEEECCCCC >Mature Secondary Structure AKYKVWIENEKCISDAVCAHLCPDVFEMNEEYKAVIVPQYRTGDNPAEGVIPEELKDCA CCEEEEECCCHHHHHHHHHHHCHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH EQAAAACPVQIIHVEPLQE HHHHHCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA