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The map label for this gene is ybhR [H]

Identifier: 156936942

GI number: 156936942

Start: 132698

End: 133465

Strand: Direct

Name: ybhR [H]

Synonym: Igni_0147

Alternate gene names: 156936942

Gene position: 132698-133465 (Clockwise)

Preceding gene: 156936941

Following gene: 156936943

Centisome position: 10.23

GC content: 53.26

Gene sequence:

>768_bases
ATGGACGTGTTGTTAGCGATGGCATATAGGCAACTGAAAAAGTTCTTGAGAGCAAGGGCCAGAGTGCTGTCAATGCTAAC
CATGCCGCTGTTCTGGGTGCTCTTCTTCGGAGTGGGGTGGGCGTCCAGCATGAACTTCCCTGGGATCGAGCTGATCCTAG
GTACCGACTACTTAAGCTTCATGTTGCCTGGAGTAATAGCTATGACGGTGTTCACTTCCGGACTTATGTCCGGCGCGTCC
GTCATATGGGACAGGCAGCTCGGCTTCCTCAAGGAGGTCCTAGTAGCCCCGACCTCCAAGCTGGAGGCAGTGCTAGGGAG
GATCTTGGGTGACTCGTTGGTGGCCTCGCTCCAAGGTTCCGTAATGCTCCTAATAGGCTACTTGATAGCCACGAACATGT
ACCTCTCTGGCGCTCTCCCAGCAATCATAATAATGTTCATGACGGCTATGGGCTTCAGCGCGTTAGGAGTGACCATGGCT
TCTTTGAGGCACGTAAAGTCCGTTGAAGGCTTCTTCGCTATGGTGAATTTGCTCATGATGCCGGCCATATTCGCTTCTGG
CGCCTTCTTCCCACTAAACAACTTACCGGACTGGTTCTGGATCATAAGCTACACGGACCCCTTGACTTACAGCGTAGACT
TAATGCGGTACTTCTTGGTAGGCGTGAACAAGTTCGAGCCTCTGAAGGACCTCTGCGCCCTACTGGTATTCGACGCGTCG
GCGCTGCTGTTAGCGACTAAGCTGTTTGAGCGCTCGGACGTGGAGTGA

Upstream 100 bases:

>100_bases
AACGAAGTGTTCTTGAAGCTCACTGGAAGAGAACTTAGAGATGAGGATTCAAATGATTATTTGAAACACATAATCACTAA
GAGGATGTGGGGCTGAGAGT

Downstream 100 bases:

>100_bases
GGTTTTTGACTCCCACTTATGGGCAGCGTGGGGTCTCGGAAGGTGGCTGAGGACGAGGGGATCGTCCTAGTAGTTAGGAT
AGGTGAGGGGGAAAACGCGA

Product: daunorubicin resistance ABC transporter, inner membrane subunit B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MDVLLAMAYRQLKKFLRARARVLSMLTMPLFWVLFFGVGWASSMNFPGIELILGTDYLSFMLPGVIAMTVFTSGLMSGAS
VIWDRQLGFLKEVLVAPTSKLEAVLGRILGDSLVASLQGSVMLLIGYLIATNMYLSGALPAIIIMFMTAMGFSALGVTMA
SLRHVKSVEGFFAMVNLLMMPAIFASGAFFPLNNLPDWFWIISYTDPLTYSVDLMRYFLVGVNKFEPLKDLCALLVFDAS
ALLLATKLFERSDVE

Sequences:

>Translated_255_residues
MDVLLAMAYRQLKKFLRARARVLSMLTMPLFWVLFFGVGWASSMNFPGIELILGTDYLSFMLPGVIAMTVFTSGLMSGAS
VIWDRQLGFLKEVLVAPTSKLEAVLGRILGDSLVASLQGSVMLLIGYLIATNMYLSGALPAIIIMFMTAMGFSALGVTMA
SLRHVKSVEGFFAMVNLLMMPAIFASGAFFPLNNLPDWFWIISYTDPLTYSVDLMRYFLVGVNKFEPLKDLCALLVFDAS
ALLLATKLFERSDVE
>Mature_255_residues
MDVLLAMAYRQLKKFLRARARVLSMLTMPLFWVLFFGVGWASSMNFPGIELILGTDYLSFMLPGVIAMTVFTSGLMSGAS
VIWDRQLGFLKEVLVAPTSKLEAVLGRILGDSLVASLQGSVMLLIGYLIATNMYLSGALPAIIIMFMTAMGFSALGVTMA
SLRHVKSVEGFFAMVNLLMMPAIFASGAFFPLNNLPDWFWIISYTDPLTYSVDLMRYFLVGVNKFEPLKDLCALLVFDAS
ALLLATKLFERSDVE

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=200, Percent_Identity=28, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28168; Mature: 28168

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]