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The map label for this gene is pfdA

Identifier: 156936882

GI number: 156936882

Start: 84340

End: 84822

Strand: Direct

Name: pfdA

Synonym: Igni_0087

Alternate gene names: 156936882

Gene position: 84340-84822 (Clockwise)

Preceding gene: 156936876

Following gene: 156936883

Centisome position: 6.5

GC content: 56.73

Gene sequence:

>483_bases
ATGTCTTCTGCAAACCCTTCTCGCCCGGTGGAAGGGGTGGCCGAGGAGAAGGCCCAAGTCGGCGTCGAGGCTAAGGGCGG
AGAAGAGAAGGTAAAGCTCCTACAAGACGAGCTGAGGAGCTTGCTGGCGCAGATAGAGTACTTGAGAGACCAAATAGAGG
CGGTCAACACCGTGATAGACGACCTCTACGCCAGCTTGGAGGTGTTGGACTACTTGACCAAGGAGGGCAAGGGCAAGGTG
GTGTTGGTGCCTATAGGCGCGGGCAACTTCATCAAGGCTAAGATTGAGGACACGAACACTGTAATAACGTCCGTCGGGGG
AAGGCTGAGCTTAGAGGTGCCCAGCGATGAGGCCAAGAAGGCTATAGAGAGCAGAATAGCCGCCTTGGAGCAAGTCAGAC
TGACGCTGCTGAGGAAGTTGGAGGAGCTAAACAGGAAGGTGAACGAGCTCCTCCCCCGCGTAAGGGAAGAGGGCGGGCAG
TGA

Upstream 100 bases:

>100_bases
CGGCTCACCGCGCGGATTAAACTGATTTATGCAATATATATTTCTCAAGTAATAGAAAATAGAACAGATTGAACCGTTCG
ACTATATCGCTCTAACTTAT

Downstream 100 bases:

>100_bases
AGGTGGTCCCTTGAAGGTTTTTGGCCCTAAGGGCCGCGGCGCCGAGCCCCCCGAAGTTAAGGCGGCGGAGCTGGAGGAGG
CACTAAAACTAATCAAAGAA

Product: prefoldin, alpha subunit

Products: NA

Alternate protein names: GimC subunit alpha

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSSANPSRPVEGVAEEKAQVGVEAKGGEEKVKLLQDELRSLLAQIEYLRDQIEAVNTVIDDLYASLEVLDYLTKEGKGKV
VLVPIGAGNFIKAKIEDTNTVITSVGGRLSLEVPSDEAKKAIESRIAALEQVRLTLLRKLEELNRKVNELLPRVREEGGQ

Sequences:

>Translated_160_residues
MSSANPSRPVEGVAEEKAQVGVEAKGGEEKVKLLQDELRSLLAQIEYLRDQIEAVNTVIDDLYASLEVLDYLTKEGKGKV
VLVPIGAGNFIKAKIEDTNTVITSVGGRLSLEVPSDEAKKAIESRIAALEQVRLTLLRKLEELNRKVNELLPRVREEGGQ
>Mature_159_residues
SSANPSRPVEGVAEEKAQVGVEAKGGEEKVKLLQDELRSLLAQIEYLRDQIEAVNTVIDDLYASLEVLDYLTKEGKGKVV
LVPIGAGNFIKAKIEDTNTVITSVGGRLSLEVPSDEAKKAIESRIAALEQVRLTLLRKLEELNRKVNELLPRVREEGGQ

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding

COG id: COG1730

COG function: function code O; Predicted prefoldin, molecular chaperone implicated in de novo protein folding

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin alpha subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PFDA_IGNH4 (A8A8L9)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001434678.1
- ProteinModelPortal:   A8A8L9
- SMR:   A8A8L9
- STRING:   A8A8L9
- GeneID:   5562080
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0087
- eggNOG:   arNOG11546
- HOGENOM:   HBG509190
- OMA:   TIATLRQ
- BioCyc:   IHOS453591:IGNI_0087-MONOMER
- HAMAP:   MF_00308
- InterPro:   IPR011599
- InterPro:   IPR009053
- InterPro:   IPR004127
- TIGRFAMs:   TIGR00293

Pfam domain/function: PF02996 Prefoldin; SSF46579 Prefoldin

EC number: NA

Molecular weight: Translated: 17549; Mature: 17418

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSANPSRPVEGVAEEKAQVGVEAKGGEEKVKLLQDELRSLLAQIEYLRDQIEAVNTVID
CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLYASLEVLDYLTKEGKGKVVLVPIGAGNFIKAKIEDTNTVITSVGGRLSLEVPSDEAKK
HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCHHHHHHHCCCEEEEECCCHHHHH
AIESRIAALEQVRLTLLRKLEELNRKVNELLPRVREEGGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSANPSRPVEGVAEEKAQVGVEAKGGEEKVKLLQDELRSLLAQIEYLRDQIEAVNTVID
CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLYASLEVLDYLTKEGKGKVVLVPIGAGNFIKAKIEDTNTVITSVGGRLSLEVPSDEAKK
HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCHHHHHHHCCCEEEEECCCHHHHH
AIESRIAALEQVRLTLLRKLEELNRKVNELLPRVREEGGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA