| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936870
Identifier: 156936870
GI number: 156936870
Start: 71690
End: 72067
Strand: Reverse
Name: 156936870
Synonym: Igni_0075
Alternate gene names: NA
Gene position: 72067-71690 (Counterclockwise)
Preceding gene: 156936871
Following gene: 156936869
Centisome position: 5.55
GC content: 48.94
Gene sequence:
>378_bases GTGGCCAACGTGAGGTTCGGCGTGGCGTTACCAAAGGAATTGGCGGAGCGCTTAGACGAAGTTGCGGAAAGGTTGAACGT ATCGAGGTCCAAAGTAATAGAGATGGCTACGTCTGCTTTCATTAACTATTTGGAAGCCCTTGAAGATCCAAACAAAGCAA CTATATTTGTGGTGATAGCCCCCGCGAGCGAGCTCGAGAAGGTAGTTAGAGCTCTGGAGCCGCTAGAAGCGCCCGCTTTC GCATGTGTGATAATGAAGAGTAAGTATGTCATTTTGTTAATAAACGTAAACGGTCAAGAGGTATCTGTCTTGGAAACGTT GAGGAAGTTGAAGGGGGCCGTCTATCCAATAGTCTACCCGGGCTCCAACGGGGTGTGA
Upstream 100 bases:
>100_bases GCGTTGGTCATATCTTGGTGGGTGCTGGAAGTAGGGTAAGAGAGTTAATAATTTTAAAATTTTAAATCCGAACTTGGGTC TCCCTTTGCTCGGGGTTTGA
Downstream 100 bases:
>100_bases CCGGTGCAACTACGCAAGTTGGCCTTGCCGACTTACATTATTTTAATTTCCGTGGTATTTGGGAGCTATTCCGTGCTGAG GTTCCTAGACCTCAGGTTCT
Product: CopG family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MANVRFGVALPKELAERLDEVAERLNVSRSKVIEMATSAFINYLEALEDPNKATIFVVIAPASELEKVVRALEPLEAPAF ACVIMKSKYVILLINVNGQEVSVLETLRKLKGAVYPIVYPGSNGV
Sequences:
>Translated_125_residues MANVRFGVALPKELAERLDEVAERLNVSRSKVIEMATSAFINYLEALEDPNKATIFVVIAPASELEKVVRALEPLEAPAF ACVIMKSKYVILLINVNGQEVSVLETLRKLKGAVYPIVYPGSNGV >Mature_124_residues ANVRFGVALPKELAERLDEVAERLNVSRSKVIEMATSAFINYLEALEDPNKATIFVVIAPASELEKVVRALEPLEAPAFA CVIMKSKYVILLINVNGQEVSVLETLRKLKGAVYPIVYPGSNGV
Specific function: Unknown
COG id: COG0864
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13673; Mature: 13542
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVRFGVALPKELAERLDEVAERLNVSRSKVIEMATSAFINYLEALEDPNKATIFVVIA CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC PASELEKVVRALEPLEAPAFACVIMKSKYVILLINVNGQEVSVLETLRKLKGAVYPIVYP CHHHHHHHHHHHCCCCCCHHEEEEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEC GSNGV CCCCC >Mature Secondary Structure ANVRFGVALPKELAERLDEVAERLNVSRSKVIEMATSAFINYLEALEDPNKATIFVVIA CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC PASELEKVVRALEPLEAPAFACVIMKSKYVILLINVNGQEVSVLETLRKLKGAVYPIVYP CHHHHHHHHHHHCCCCCCHHEEEEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEC GSNGV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA