Definition Ignicoccus hospitalis KIN4/I chromosome, complete genome.
Accession NC_009776
Length 1,297,538

Click here to switch to the map view.

The map label for this gene is 156936845

Identifier: 156936845

GI number: 156936845

Start: 47461

End: 48195

Strand: Direct

Name: 156936845

Synonym: Igni_0050

Alternate gene names: NA

Gene position: 47461-48195 (Clockwise)

Preceding gene: 156936844

Following gene: 156936846

Centisome position: 3.66

GC content: 55.51

Gene sequence:

>735_bases
GTGTCCCTGGCAGTAGCTCTGGAGGCCGGCATATGTAAGCCCGGGAACGTCTGTCCGGAGAGGGCCGGAAGCTTCTCATA
TCCCGACATACTAGTGGACGCCTTCGAGCTCCAGTGGGCGTGTCGCCTCTCTCAAAGGGGCGCCCCGCTGGGACTGGTTT
ACCGCGAGGCCTTGGGGGCTCAGCGGAGTACCCTTACGGGTTATGTCATATTAGCGGTACCCCTAATGAGACACTTGTCG
AAGGGGTTGGATGCGACTAAGCGCGCTTTGGAAGATCTGAAGGCGAGTAAGGTTTACGACGCACAGCTCTTCTTGAAGTC
CCTCTCGGAAACCGGCTTAAGCCACTACAAGAAGGTAGAAGGCTTCGTCGACGCCGACGAGTGGTGGACATTCGAGGGAA
ACCTCTGGGACCTCTTCCTCTACTTGTCGAAATTTGACGACTTGTTTAGAGAGATAGTTAAAGGATATCCGTTAAGCTTG
GAAGGCGCCCTCCGACTAATTCGGGAGGGTTATTCCAAGCGCACGCTCGAAGGGCTGCAGCGCTTCGTGCTTTCTAACAT
TATAGACAGTTTGGTGGCTCGCAAGCACGGCTACAGGGTGGCCTTGGGGCTCAATAGGGCCGCCAAGGAGGGCTACCACA
GTTGGTACATCGAGGATAAAGGGATAAACCCGGGGACCGCCGCTGACATAATAGCCGTTTCAATACTTCTGGCGCTGGCT
GAGGAAGCGAGATGA

Upstream 100 bases:

>100_bases
GGGGTTATGAGGTCGTTATCGAAGGAATCCTAGAGGTGAGGGCGGACGGGGTGAGAGTATCCTTACCTCCGGGAGGAAGG
TTAGAGATACTTGCTCCTTA

Downstream 100 bases:

>100_bases
AGGTGGAAGTGACGTCTGAGGCAATAAGGAAGGCTAAGCTAGTCGGGCCGGTAATATATCAAAAGCACGTTAAGGGGAAG
GCCGAAGTAGGCGAGCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSLAVALEAGICKPGNVCPERAGSFSYPDILVDAFELQWACRLSQRGAPLGLVYREALGAQRSTLTGYVILAVPLMRHLS
KGLDATKRALEDLKASKVYDAQLFLKSLSETGLSHYKKVEGFVDADEWWTFEGNLWDLFLYLSKFDDLFREIVKGYPLSL
EGALRLIREGYSKRTLEGLQRFVLSNIIDSLVARKHGYRVALGLNRAAKEGYHSWYIEDKGINPGTAADIIAVSILLALA
EEAR

Sequences:

>Translated_244_residues
MSLAVALEAGICKPGNVCPERAGSFSYPDILVDAFELQWACRLSQRGAPLGLVYREALGAQRSTLTGYVILAVPLMRHLS
KGLDATKRALEDLKASKVYDAQLFLKSLSETGLSHYKKVEGFVDADEWWTFEGNLWDLFLYLSKFDDLFREIVKGYPLSL
EGALRLIREGYSKRTLEGLQRFVLSNIIDSLVARKHGYRVALGLNRAAKEGYHSWYIEDKGINPGTAADIIAVSILLALA
EEAR
>Mature_243_residues
SLAVALEAGICKPGNVCPERAGSFSYPDILVDAFELQWACRLSQRGAPLGLVYREALGAQRSTLTGYVILAVPLMRHLSK
GLDATKRALEDLKASKVYDAQLFLKSLSETGLSHYKKVEGFVDADEWWTFEGNLWDLFLYLSKFDDLFREIVKGYPLSLE
GALRLIREGYSKRTLEGLQRFVLSNIIDSLVARKHGYRVALGLNRAAKEGYHSWYIEDKGINPGTAADIIAVSILLALAE
EAR

Specific function: Unknown

COG id: COG1767

COG function: function code H; Triphosphoribosyl-dephospho-CoA synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27175; Mature: 27043

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAVALEAGICKPGNVCPERAGSFSYPDILVDAFELQWACRLSQRGAPLGLVYREALGA
CCEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
QRSTLTGYVILAVPLMRHLSKGLDATKRALEDLKASKVYDAQLFLKSLSETGLSHYKKVE
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVDADEWWTFEGNLWDLFLYLSKFDDLFREIVKGYPLSLEGALRLIREGYSKRTLEGLQ
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHH
RFVLSNIIDSLVARKHGYRVALGLNRAAKEGYHSWYIEDKGINPGTAADIIAVSILLALA
HHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
EEAR
HHCC
>Mature Secondary Structure 
SLAVALEAGICKPGNVCPERAGSFSYPDILVDAFELQWACRLSQRGAPLGLVYREALGA
CEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
QRSTLTGYVILAVPLMRHLSKGLDATKRALEDLKASKVYDAQLFLKSLSETGLSHYKKVE
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVDADEWWTFEGNLWDLFLYLSKFDDLFREIVKGYPLSLEGALRLIREGYSKRTLEGLQ
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHH
RFVLSNIIDSLVARKHGYRVALGLNRAAKEGYHSWYIEDKGINPGTAADIIAVSILLALA
HHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
EEAR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA