Click here to switch to the map view.

The map label for this gene is 156936841

Identifier: 156936841

GI number: 156936841

Start: 44652

End: 45074

Strand: Reverse

Name: 156936841

Synonym: Igni_0046

Alternate gene names: NA

Gene position: 45074-44652 (Counterclockwise)

Preceding gene: 156936847

Following gene: 156936839

Centisome position: 3.47

GC content: 56.5

Gene sequence:

>423_bases
ATGAGGGTCCTCGACGAGCGTGAGCTCGAGCGCCTCAAGAGGAGGCTAGTAATAGCCGATACGTCGGTACTATTACTCAT
AGCTGAGGGGATAGACGTTATAGGCCAGATAGAGGAAATGGGTGGTTTGTGCGCCGTCACGCCATCGGTCTTGCGAGAGC
TGGAACGGATCTCCGAGGAGCAGAGCAAGAGAGGGAGGGCGGCGAGGCTCGTCCTTCCTATAGTCTTGGAGCAGTGTCCG
ATCCTCAACGCCAACCTCGAGAGGAGGACCGACGACGACATAGTTTCGATTGCCCTAAGGTATGGCTTAGCCGTGGCCAC
GGCTGACAAGGGACTTCGGAGGAGGCTGTTGAGAAAGGTGCCCACAATCTATTATCGCGAGGCGCAGAGGAGGCTGTACA
GCGAAGACTTCTTCGCGTACTGA

Upstream 100 bases:

>100_bases
CAGTAGGGCCAATATGTAGACAAGCGCTTTCACGTTACGTACCCGCGCCCGTTTACTCACATGGAGTTTTTACCTTGTTG
AGGTAGAGCCGTCGCGGGTC

Downstream 100 bases:

>100_bases
AGCAACCACTCCTCCAAGCCGACCTTACTGACCGGGGTGATCGGGGTCCCGTAGACCACATTGCCTTCATAATAGTCATT
AATAAAAACGACGTTTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MRVLDERELERLKRRLVIADTSVLLLIAEGIDVIGQIEEMGGLCAVTPSVLRELERISEEQSKRGRAARLVLPIVLEQCP
ILNANLERRTDDDIVSIALRYGLAVATADKGLRRRLLRKVPTIYYREAQRRLYSEDFFAY

Sequences:

>Translated_140_residues
MRVLDERELERLKRRLVIADTSVLLLIAEGIDVIGQIEEMGGLCAVTPSVLRELERISEEQSKRGRAARLVLPIVLEQCP
ILNANLERRTDDDIVSIALRYGLAVATADKGLRRRLLRKVPTIYYREAQRRLYSEDFFAY
>Mature_140_residues
MRVLDERELERLKRRLVIADTSVLLLIAEGIDVIGQIEEMGGLCAVTPSVLRELERISEEQSKRGRAARLVLPIVLEQCP
ILNANLERRTDDDIVSIALRYGLAVATADKGLRRRLLRKVPTIYYREAQRRLYSEDFFAY

Specific function: Unknown

COG id: COG1412

COG function: function code R; Uncharacterized proteins of PilT N-term./Vapc superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16083; Mature: 16083

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLDERELERLKRRLVIADTSVLLLIAEGIDVIGQIEEMGGLCAVTPSVLRELERISEE
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHH
QSKRGRAARLVLPIVLEQCPILNANLERRTDDDIVSIALRYGLAVATADKGLRRRLLRKV
HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PTIYYREAQRRLYSEDFFAY
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVLDERELERLKRRLVIADTSVLLLIAEGIDVIGQIEEMGGLCAVTPSVLRELERISEE
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHH
QSKRGRAARLVLPIVLEQCPILNANLERRTDDDIVSIALRYGLAVATADKGLRRRLLRKV
HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PTIYYREAQRRLYSEDFFAY
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA