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The map label for this gene is ywaF [H]

Identifier: 154687157

GI number: 154687157

Start: 2856009

End: 2856728

Strand: Reverse

Name: ywaF [H]

Synonym: RBAM_027290

Alternate gene names: 154687157

Gene position: 2856728-2856009 (Counterclockwise)

Preceding gene: 154687158

Following gene: 154687156

Centisome position: 72.9

GC content: 47.5

Gene sequence:

>720_bases
ATGCAGAGATATTTTCAATTGAAATCTGAAACAGGGGCCTTTCATCTATTTTCCAAGGAACACATTTTCACGCTTTTGGT
CATCGGATTGCTTGGGGTGTGCGTGATCGTATTCCGGAAACAGCTCAACTACGGCCGGTCGAATCGCGTTTTCCGCTATG
TACTGTTCATTCTCCTTGCCGTGTCGCAGATCAGCTATCATATATGGCTGCTTTGTCATCATGCCTGGTCGCTGAAAACA
GCTCTGCCGCTGCAGCTGAGCGACCTTTCCGTCTATTTGGCGATGCTGATGGTCATGACAAAAAGCAAAAAACTGTTCGC
CTTCCTCTATTTTGCCGGTTTGGGCAGCGCCGTACAGGCGATGGCAACACCTGATTTAGGGGCGTATTCTTTCCCTCATT
TTCGGTACATCGTGTTTTTCGTCTCCCACGGCTGTGTTTTTCTTACCTGCCTATTCATGGCCGCTTCAGAAAGGTACAGA
CCGTCGGCGCGCGGACTGTGGGTGTCTGTGCTGATCGTAAATCTGTACGGGGCGTGTGTCTTTTTTATTGATCGTGTGCT
GAATGCGAATTACTTATATTTAATGAAAAAACCGAAGACCGCTTCGCTTCTGAACGTTTTCGGACCTTGGCCGTGGTATC
TTCTATCAATGGAAGCGGCGGTGATATTGAGCTTTTTCATTCTGTATATTCCGTTTTGGCTGCTGAGGAAAAGAGCATGA

Upstream 100 bases:

>100_bases
TTGAGGAGCCTCCGCATAAGCGGAGGCTTTTTTGTATGAATAGAAGAAAGCGATTTTTAAAAGAATAGACATACGTCATT
TTTTCGCGCGGGGGAGCCTT

Downstream 100 bases:

>100_bases
GGCCGGCCTGTTTTTGTGAATCCAATCATTTGTAATTTTTTCAACATTCCGGCATTATTTTTTTCAGATTCTGATGTTGA
AAAAAGACGTTCGCGGCGAT

Product: YwaF

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MQRYFQLKSETGAFHLFSKEHIFTLLVIGLLGVCVIVFRKQLNYGRSNRVFRYVLFILLAVSQISYHIWLLCHHAWSLKT
ALPLQLSDLSVYLAMLMVMTKSKKLFAFLYFAGLGSAVQAMATPDLGAYSFPHFRYIVFFVSHGCVFLTCLFMAASERYR
PSARGLWVSVLIVNLYGACVFFIDRVLNANYLYLMKKPKTASLLNVFGPWPWYLLSMEAAVILSFFILYIPFWLLRKRA

Sequences:

>Translated_239_residues
MQRYFQLKSETGAFHLFSKEHIFTLLVIGLLGVCVIVFRKQLNYGRSNRVFRYVLFILLAVSQISYHIWLLCHHAWSLKT
ALPLQLSDLSVYLAMLMVMTKSKKLFAFLYFAGLGSAVQAMATPDLGAYSFPHFRYIVFFVSHGCVFLTCLFMAASERYR
PSARGLWVSVLIVNLYGACVFFIDRVLNANYLYLMKKPKTASLLNVFGPWPWYLLSMEAAVILSFFILYIPFWLLRKRA
>Mature_239_residues
MQRYFQLKSETGAFHLFSKEHIFTLLVIGLLGVCVIVFRKQLNYGRSNRVFRYVLFILLAVSQISYHIWLLCHHAWSLKT
ALPLQLSDLSVYLAMLMVMTKSKKLFAFLYFAGLGSAVQAMATPDLGAYSFPHFRYIVFFVSHGCVFLTCLFMAASERYR
PSARGLWVSVLIVNLYGACVFFIDRVLNANYLYLMKKPKTASLLNVFGPWPWYLLSMEAAVILSFFILYIPFWLLRKRA

Specific function: Unknown

COG id: COG5522

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011737 [H]

Pfam domain/function: PF09529 Intg_mem_TP0381 [H]

EC number: NA

Molecular weight: Translated: 27638; Mature: 27638

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRYFQLKSETGAFHLFSKEHIFTLLVIGLLGVCVIVFRKQLNYGRSNRVFRYVLFILLA
CCCHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VSQISYHIWLLCHHAWSLKTALPLQLSDLSVYLAMLMVMTKSKKLFAFLYFAGLGSAVQA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
MATPDLGAYSFPHFRYIVFFVSHGCVFLTCLFMAASERYRPSARGLWVSVLIVNLYGACV
HCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FFIDRVLNANYLYLMKKPKTASLLNVFGPWPWYLLSMEAAVILSFFILYIPFWLLRKRA
HHHHHHHCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQRYFQLKSETGAFHLFSKEHIFTLLVIGLLGVCVIVFRKQLNYGRSNRVFRYVLFILLA
CCCHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VSQISYHIWLLCHHAWSLKTALPLQLSDLSVYLAMLMVMTKSKKLFAFLYFAGLGSAVQA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
MATPDLGAYSFPHFRYIVFFVSHGCVFLTCLFMAASERYRPSARGLWVSVLIVNLYGACV
HCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FFIDRVLNANYLYLMKKPKTASLLNVFGPWPWYLLSMEAAVILSFFILYIPFWLLRKRA
HHHHHHHCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1806041; 7934828; 9384377 [H]