| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is ytgP [H]
Identifier: 154687142
GI number: 154687142
Start: 2838574
End: 2840211
Strand: Reverse
Name: ytgP [H]
Synonym: RBAM_027140
Alternate gene names: 154687142
Gene position: 2840211-2838574 (Counterclockwise)
Preceding gene: 154687145
Following gene: 154687141
Centisome position: 72.48
GC content: 48.9
Gene sequence:
>1638_bases ATGTCAAGCAAATTGTTAAGGGGCACGTTCGTGCTGACGCTCGGCACCTATATATCGCGGATTTTAGGGATGATTTATCT GATCCCGTTCGGAGCGATGGTCGGAGCGACGGGCGGAGCTTTGTTTCAATACGGATATAATCAATATACACTGTTTTTAA ACATTGCCACGATGGGATTTCCCGCCGCGGTTTCAAAATTTGTCTCGAAATATAACTCCAAAGGAGACTATGAGACGAGC AGGCGGATGCTGAGAGCGGGAATGTCGGTTATGCTCGTAACCGGGATGATCGCTTTTTCAATTCTTTATATTTCGGCGCC GTTTTTTGCGGAAACATCTCTCGGCGGCACGAGTAACAACGGACTTACGATTGACCACGTCGTTTATGTCATCCGGATGG TCAGTCTGGCACTTTTGGTCGTGCCGATTATGAGTCTTGTGCGCGGTTTTTTCCAAGGTCATCAGATGATGGGGCCGACA GCCGTTTCACAGGTTGTGGAGCAGCTTGCCCGGATCATCTTTTTATTGGGCGCAACGTATTTGATTTTAAGAGTGATCAA CGGCGGCCTTGTCATCGCAGTCGGATACGCGACTTTCGCGGCGCTGATCGGATCATTCGGAGGGCTTGTCGTCCTTTATA TTTACTGGAATAAGCGGAAGGGCGATCTTCTGGCGATGAAGCCGAATCTCGTCCCGTCTGCGAACTTAAGTTATAAAAAA ATGTTCATTGAGCTTTTCAGTTATGCCGCTCCTTACGTATTTGTCGGACTGGCGATTCCTTTGTATTCGTATATCGATAC GAATACGTTTAATAAAGCGATGATTGCGGCGGGCCACAAGGATATCAGCCAGGACATGCTTGCGATTGTCACCCTTTATG TGCCGAAGCTTGTCATGATCCCGGTTTCTCTGGCGACCGCTTTCGGTCTGACGCTGATTCCGACGATTACTGAATCGTTT ACGAGCAGGAATTATAAGCTTTTGAACCAGCAGATTAACCAGACGATGCAAATCATTCTGTTTTTGGTTATTCCCGCCGT TGTCGGGATGTCCGTGTTATCGGGTCCGGCCTATACGTTCTTCTACGGCTCTGAAAGTCTTCGCCCGGATATCGGACAGG ATATATTGTTCTGGTACGCGCCTGTCGCGATACTGTTTTCTCTGTTTACCGTAAACGCCGCGATCCTGCAAGGGATTAAT AAGCAGAAATTTGCTGTCGTGAGCCTTTTCATCGGCGTCATTATAAAAGTGGTGCTGAACATGCCGCTGATCAAGCTGTT TCAGGGAGACGGGGCCATCTTGGCAACGGCGCTCGGTTATATCGCTTCTCTTCTGTACGGTTTTATTATGATTAAGCGCC ATGCGGGCTATTCGTATACGGTACTTATAAAACGGGTCATTTTAATCGCAGTCCTGTCCGTCCTGATGGGAGTCGCGGTC AAGCTGACTCAATGGCTGCTCAGCTTCTTTGTAACATACCAAAGCGGCCAGGTGCATGCGGCGATTGTCGTCTTTGTCTG CGCCGCTGTCGGCGGTGCGGTGTACATGTTTGCCGCGTACCGAATCGGATTTTTACAGAAAATGTTTGGAAACCGTCTGC CCCGCGTTTTAAGGAGAGGCAGGCATTCCGCCCATTGA
Upstream 100 bases:
>100_bases TTTTCCCAAAAAGTTTCCCGCTGTAATTATTACCGTCTAATTGCCCAGTTGTGTTAAAATAGAAAAGTTGAATCTTCGTA GAAAATGGTGATGAGGAAAC
Downstream 100 bases:
>100_bases GAAATAATGAATAGTCCGCTTATCGCGGGCTTTTCTTTTTAAAGGAGAGGATCAGGATGAGACTTGATAAGCTGCTTGCC AACAGCGGATTCGGCTCAAG
Product: YtgP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MSSKLLRGTFVLTLGTYISRILGMIYLIPFGAMVGATGGALFQYGYNQYTLFLNIATMGFPAAVSKFVSKYNSKGDYETS RRMLRAGMSVMLVTGMIAFSILYISAPFFAETSLGGTSNNGLTIDHVVYVIRMVSLALLVVPIMSLVRGFFQGHQMMGPT AVSQVVEQLARIIFLLGATYLILRVINGGLVIAVGYATFAALIGSFGGLVVLYIYWNKRKGDLLAMKPNLVPSANLSYKK MFIELFSYAAPYVFVGLAIPLYSYIDTNTFNKAMIAAGHKDISQDMLAIVTLYVPKLVMIPVSLATAFGLTLIPTITESF TSRNYKLLNQQINQTMQIILFLVIPAVVGMSVLSGPAYTFFYGSESLRPDIGQDILFWYAPVAILFSLFTVNAAILQGIN KQKFAVVSLFIGVIIKVVLNMPLIKLFQGDGAILATALGYIASLLYGFIMIKRHAGYSYTVLIKRVILIAVLSVLMGVAV KLTQWLLSFFVTYQSGQVHAAIVVFVCAAVGGAVYMFAAYRIGFLQKMFGNRLPRVLRRGRHSAH
Sequences:
>Translated_545_residues MSSKLLRGTFVLTLGTYISRILGMIYLIPFGAMVGATGGALFQYGYNQYTLFLNIATMGFPAAVSKFVSKYNSKGDYETS RRMLRAGMSVMLVTGMIAFSILYISAPFFAETSLGGTSNNGLTIDHVVYVIRMVSLALLVVPIMSLVRGFFQGHQMMGPT AVSQVVEQLARIIFLLGATYLILRVINGGLVIAVGYATFAALIGSFGGLVVLYIYWNKRKGDLLAMKPNLVPSANLSYKK MFIELFSYAAPYVFVGLAIPLYSYIDTNTFNKAMIAAGHKDISQDMLAIVTLYVPKLVMIPVSLATAFGLTLIPTITESF TSRNYKLLNQQINQTMQIILFLVIPAVVGMSVLSGPAYTFFYGSESLRPDIGQDILFWYAPVAILFSLFTVNAAILQGIN KQKFAVVSLFIGVIIKVVLNMPLIKLFQGDGAILATALGYIASLLYGFIMIKRHAGYSYTVLIKRVILIAVLSVLMGVAV KLTQWLLSFFVTYQSGQVHAAIVVFVCAAVGGAVYMFAAYRIGFLQKMFGNRLPRVLRRGRHSAH >Mature_544_residues SSKLLRGTFVLTLGTYISRILGMIYLIPFGAMVGATGGALFQYGYNQYTLFLNIATMGFPAAVSKFVSKYNSKGDYETSR RMLRAGMSVMLVTGMIAFSILYISAPFFAETSLGGTSNNGLTIDHVVYVIRMVSLALLVVPIMSLVRGFFQGHQMMGPTA VSQVVEQLARIIFLLGATYLILRVINGGLVIAVGYATFAALIGSFGGLVVLYIYWNKRKGDLLAMKPNLVPSANLSYKKM FIELFSYAAPYVFVGLAIPLYSYIDTNTFNKAMIAAGHKDISQDMLAIVTLYVPKLVMIPVSLATAFGLTLIPTITESFT SRNYKLLNQQINQTMQIILFLVIPAVVGMSVLSGPAYTFFYGSESLRPDIGQDILFWYAPVAILFSLFTVNAAILQGINK QKFAVVSLFIGVIIKVVLNMPLIKLFQGDGAILATALGYIASLLYGFIMIKRHAGYSYTVLIKRVILIAVLSVLMGVAVK LTQWLLSFFVTYQSGQVHAAIVVFVCAAVGGAVYMFAAYRIGFLQKMFGNRLPRVLRRGRHSAH
Specific function: May play a role in cell division, although it is not essential for growth [H]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential). Note=Localizes at the septum [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 59712; Mature: 59581
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKLLRGTFVLTLGTYISRILGMIYLIPFGAMVGATGGALFQYGYNQYTLFLNIATMGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEHHHCC PAAVSKFVSKYNSKGDYETSRRMLRAGMSVMLVTGMIAFSILYISAPFFAETSLGGTSNN HHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GLTIDHVVYVIRMVSLALLVVPIMSLVRGFFQGHQMMGPTAVSQVVEQLARIIFLLGATY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LILRVINGGLVIAVGYATFAALIGSFGGLVVLYIYWNKRKGDLLAMKPNLVPSANLSYKK HHHHHHCCCEEEEEHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCHHHH MFIELFSYAAPYVFVGLAIPLYSYIDTNTFNKAMIAAGHKDISQDMLAIVTLYVPKLVMI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH PVSLATAFGLTLIPTITESFTSRNYKLLNQQINQTMQIILFLVIPAVVGMSVLSGPAYTF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE FYGSESLRPDIGQDILFWYAPVAILFSLFTVNAAILQGINKQKFAVVSLFIGVIIKVVLN EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC MPLIKLFQGDGAILATALGYIASLLYGFIMIKRHAGYSYTVLIKRVILIAVLSVLMGVAV CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH KLTQWLLSFFVTYQSGQVHAAIVVFVCAAVGGAVYMFAAYRIGFLQKMFGNRLPRVLRRG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RHSAH CCCCC >Mature Secondary Structure SSKLLRGTFVLTLGTYISRILGMIYLIPFGAMVGATGGALFQYGYNQYTLFLNIATMGF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEHHHCC PAAVSKFVSKYNSKGDYETSRRMLRAGMSVMLVTGMIAFSILYISAPFFAETSLGGTSNN HHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GLTIDHVVYVIRMVSLALLVVPIMSLVRGFFQGHQMMGPTAVSQVVEQLARIIFLLGATY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LILRVINGGLVIAVGYATFAALIGSFGGLVVLYIYWNKRKGDLLAMKPNLVPSANLSYKK HHHHHHCCCEEEEEHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCHHHH MFIELFSYAAPYVFVGLAIPLYSYIDTNTFNKAMIAAGHKDISQDMLAIVTLYVPKLVMI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH PVSLATAFGLTLIPTITESFTSRNYKLLNQQINQTMQIILFLVIPAVVGMSVLSGPAYTF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE FYGSESLRPDIGQDILFWYAPVAILFSLFTVNAAILQGINKQKFAVVSLFIGVIIKVVLN EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC MPLIKLFQGDGAILATALGYIASLLYGFIMIKRHAGYSYTVLIKRVILIAVLSVLMGVAV CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH KLTQWLLSFFVTYQSGQVHAAIVVFVCAAVGGAVYMFAAYRIGFLQKMFGNRLPRVLRRG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RHSAH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]