BacMap

Definition	Bacillus amyloliquefaciens FZB42, complete genome.
Accession	NC_009725
Length	3,918,589

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The map label for this gene is ythP [H]

Identifier: 154687139

GI number: 154687139

Start: 2836464

End: 2837168

Strand: Reverse

Name: ythP [H]

Synonym: RBAM_027110

Alternate gene names: 154687139

Gene position: 2837168-2836464 (Counterclockwise)

Preceding gene: 154687141

Following gene: 154687138

Centisome position: 72.4

GC content: 49.08

Gene sequence:

>705_bases
TTGGGAGAATTATTGAATGCAAACATTGTCTGCGCCGGTTATGCTGACAGGCCGAAGGTGATTTCTGATGTATCTCTGTC
AGTCAACGCTGGTGAAATTACCGGTTTAATCGGAGCGAACGGCGCGGGGAAAAGCACAGTGATAAAGGCGGTTCTCGGGC
TGTCCCGGGATATAGAGGGCGGAATTGAGTGGAATGATTCATCTTATGCTTACATACCGGAGCGTCCGAGTTTTTATGAT
GAACTGACGCTTTGGGAGCATCTCGAGCTGACCGGGTCATTGCGGGGTATAGAAGGAGAAGAATGCCGTGAGCGGGCAGG
GCGGCTGCTTGAAGAGTTTTCGCTGACGTCTGTAAAACATGATTTGCCTTCCGGTTTTTCAAAAGGGATGCAGCAAAAAT
TGATGCTCATACAGGCATTTTTGGCGAAGCCGGATATTTACATCATTGATGAGCCTTTTATCGGACTTGATCCGATCTCA
ACGAAGCTGTTTACCGACATGCTGATTGCTGAGAAAGAAAGGGGCGCGGGGATTTTGATGTGCACTCATGTTCTGGATAC
GGCGGAAAAAATCTGCGACCGGTTTTATTTGCTGGATCAGGGCGCTCTGCTTCTTCAAGGCACGTTAGAGGAGCTTCAGG
AAAAAACGGGGAGCCGTTCACTGCTGGATTGCTTTTATTCAGCGGTTCGGAGCAGTCAGCGATGA

Upstream 100 bases:

>100_bases
GTGCCGCCTTGGTGCATTACTATGCCCGGTCCGCTTTTATTATTATGGAAACTGAAACTTTTTTTATACATGTCCGTATG
AAAACGGGGGAGTGAGAAGT

Downstream 100 bases:

>100_bases
CCGGGCGGGCTTTGTTTTTTCAAAGGCTGTTTCATTATTGGCGGTATCAATGGAAGGTGTTTCAGACGGTCATTGATTGG
ACGGTCGCGCTGTATATCGT

Product: YthP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MGELLNANIVCAGYADRPKVISDVSLSVNAGEITGLIGANGAGKSTVIKAVLGLSRDIEGGIEWNDSSYAYIPERPSFYD
ELTLWEHLELTGSLRGIEGEECRERAGRLLEEFSLTSVKHDLPSGFSKGMQQKLMLIQAFLAKPDIYIIDEPFIGLDPIS
TKLFTDMLIAEKERGAGILMCTHVLDTAEKICDRFYLLDQGALLLQGTLEELQEKTGSRSLLDCFYSAVRSSQR

Sequences:

>Translated_234_residues
MGELLNANIVCAGYADRPKVISDVSLSVNAGEITGLIGANGAGKSTVIKAVLGLSRDIEGGIEWNDSSYAYIPERPSFYD
ELTLWEHLELTGSLRGIEGEECRERAGRLLEEFSLTSVKHDLPSGFSKGMQQKLMLIQAFLAKPDIYIIDEPFIGLDPIS
TKLFTDMLIAEKERGAGILMCTHVLDTAEKICDRFYLLDQGALLLQGTLEELQEKTGSRSLLDCFYSAVRSSQR
>Mature_233_residues
GELLNANIVCAGYADRPKVISDVSLSVNAGEITGLIGANGAGKSTVIKAVLGLSRDIEGGIEWNDSSYAYIPERPSFYDE
LTLWEHLELTGSLRGIEGEECRERAGRLLEEFSLTSVKHDLPSGFSKGMQQKLMLIQAFLAKPDIYIIDEPFIGLDPIST
KLFTDMLIAEKERGAGILMCTHVLDTAEKICDRFYLLDQGALLLQGTLEELQEKTGSRSLLDCFYSAVRSSQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI153792144, Length=229, Percent_Identity=31.8777292576419, Blast_Score=120, Evalue=9e-28,
Organism=Homo sapiens, GI27436953, Length=218, Percent_Identity=29.8165137614679, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI27477115, Length=222, Percent_Identity=30.1801801801802, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI27262624, Length=213, Percent_Identity=29.1079812206573, Blast_Score=104, Evalue=7e-23,
Organism=Homo sapiens, GI27262626, Length=213, Percent_Identity=29.1079812206573, Blast_Score=104, Evalue=7e-23,
Organism=Homo sapiens, GI6005701, Length=211, Percent_Identity=30.3317535545024, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI27881501, Length=209, Percent_Identity=28.2296650717703, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI30795238, Length=209, Percent_Identity=28.2296650717703, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI31657092, Length=221, Percent_Identity=31.6742081447964, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI105990541, Length=203, Percent_Identity=31.0344827586207, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI47078218, Length=199, Percent_Identity=28.1407035175879, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI45446740, Length=199, Percent_Identity=28.1407035175879, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI150417984, Length=236, Percent_Identity=27.1186440677966, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI116734710, Length=223, Percent_Identity=30.0448430493274, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI21536376, Length=218, Percent_Identity=28.4403669724771, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI148612844, Length=225, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI255708477, Length=225, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI48994943, Length=224, Percent_Identity=32.1428571428571, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789593, Length=233, Percent_Identity=30.9012875536481, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI87081782, Length=218, Percent_Identity=33.9449541284404, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI87082268, Length=231, Percent_Identity=29.8701298701299, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1786398, Length=216, Percent_Identity=31.4814814814815, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1789032, Length=230, Percent_Identity=26.9565217391304, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789672, Length=208, Percent_Identity=27.4038461538462, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786703, Length=201, Percent_Identity=30.3482587064677, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787029, Length=218, Percent_Identity=27.5229357798165, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1789864, Length=225, Percent_Identity=28.4444444444444, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI48995001, Length=203, Percent_Identity=27.0935960591133, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786319, Length=215, Percent_Identity=24.6511627906977, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788225, Length=232, Percent_Identity=25, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787089, Length=208, Percent_Identity=25, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788761, Length=222, Percent_Identity=23.4234234234234, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787759, Length=229, Percent_Identity=26.6375545851528, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1790525, Length=212, Percent_Identity=27.3584905660377, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI48994997, Length=225, Percent_Identity=28.4444444444444, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788165, Length=208, Percent_Identity=30.2884615384615, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788450, Length=204, Percent_Identity=26.9607843137255, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786872, Length=201, Percent_Identity=27.8606965174129, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1787370, Length=211, Percent_Identity=22.7488151658768, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI48994883, Length=207, Percent_Identity=26.5700483091787, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1789891, Length=212, Percent_Identity=25.9433962264151, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787792, Length=201, Percent_Identity=29.8507462686567, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI87081709, Length=213, Percent_Identity=23.943661971831, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1790467, Length=211, Percent_Identity=23.696682464455, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790544, Length=232, Percent_Identity=23.2758620689655, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87082267, Length=228, Percent_Identity=25.4385964912281, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1787164, Length=207, Percent_Identity=28.0193236714976, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1786253, Length=209, Percent_Identity=24.4019138755981, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081791, Length=210, Percent_Identity=22.8571428571429, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790534, Length=201, Percent_Identity=26.3681592039801, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787105, Length=197, Percent_Identity=25.3807106598985, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1790739, Length=212, Percent_Identity=26.4150943396226, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789873, Length=209, Percent_Identity=23.9234449760766, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788506, Length=214, Percent_Identity=27.5700934579439, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786345, Length=212, Percent_Identity=26.8867924528302, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI87082064, Length=210, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788644, Length=221, Percent_Identity=24.4343891402715, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787112, Length=214, Percent_Identity=28.9719626168224, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787712, Length=196, Percent_Identity=21.4285714285714, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87081834, Length=216, Percent_Identity=22.6851851851852, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786563, Length=210, Percent_Identity=25.2380952380952, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1790190, Length=215, Percent_Identity=23.2558139534884, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=233, Percent_Identity=30.9012875536481, Blast_Score=117, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI71983523, Length=215, Percent_Identity=28.3720930232558, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71983510, Length=215, Percent_Identity=28.3720930232558, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71983516, Length=215, Percent_Identity=28.3720930232558, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI115533608, Length=234, Percent_Identity=29.0598290598291, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17565586, Length=233, Percent_Identity=29.1845493562232, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193208177, Length=227, Percent_Identity=27.7533039647577, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322640, Length=238, Percent_Identity=26.4705882352941, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221512771, Length=218, Percent_Identity=29.8165137614679, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI28574150, Length=212, Percent_Identity=32.0754716981132, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI116007328, Length=212, Percent_Identity=32.0754716981132, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28571209, Length=216, Percent_Identity=29.6296296296296, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24643674, Length=210, Percent_Identity=29.0476190476191, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24666092, Length=217, Percent_Identity=28.110599078341, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24582014, Length=227, Percent_Identity=26.431718061674, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24582012, Length=227, Percent_Identity=26.431718061674, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI221500365, Length=211, Percent_Identity=30.8056872037915, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI116007184, Length=211, Percent_Identity=30.8056872037915, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI85725262, Length=228, Percent_Identity=26.3157894736842, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI28573573, Length=233, Percent_Identity=27.8969957081545, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24648314, Length=217, Percent_Identity=26.7281105990783, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28573571, Length=233, Percent_Identity=27.8969957081545, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24650855, Length=185, Percent_Identity=26.4864864864865, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24650853, Length=185, Percent_Identity=26.4864864864865, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281362751, Length=201, Percent_Identity=26.3681592039801, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24662800, Length=192, Percent_Identity=26.0416666666667, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161077321, Length=223, Percent_Identity=26.9058295964126, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 25757; Mature: 25626

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGELLNANIVCAGYADRPKVISDVSLSVNAGEITGLIGANGAGKSTVIKAVLGLSRDIEG
CCCCCCCCEEEECCCCCCCEECCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCC
GIEWNDSSYAYIPERPSFYDELTLWEHLELTGSLRGIEGEECRERAGRLLEEFSLTSVKH
CEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DLPSGFSKGMQQKLMLIQAFLAKPDIYIIDEPFIGLDPISTKLFTDMLIAEKERGAGILM
HCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEH
CTHVLDTAEKICDRFYLLDQGALLLQGTLEELQEKTGSRSLLDCFYSAVRSSQR
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GELLNANIVCAGYADRPKVISDVSLSVNAGEITGLIGANGAGKSTVIKAVLGLSRDIEG
CCCCCCCEEEECCCCCCCEECCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCC
GIEWNDSSYAYIPERPSFYDELTLWEHLELTGSLRGIEGEECRERAGRLLEEFSLTSVKH
CEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DLPSGFSKGMQQKLMLIQAFLAKPDIYIIDEPFIGLDPISTKLFTDMLIAEKERGAGILM
HCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEH
CTHVLDTAEKICDRFYLLDQGALLLQGTLEELQEKTGSRSLLDCFYSAVRSSQR
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]