Click here to switch to the map view.

The map label for this gene is ythQ [H]

Identifier: 154687138

GI number: 154687138

Start: 2835307

End: 2836467

Strand: Reverse

Name: ythQ [H]

Synonym: RBAM_027100

Alternate gene names: 154687138

Gene position: 2836467-2835307 (Counterclockwise)

Preceding gene: 154687139

Following gene: 154687136

Centisome position: 72.38

GC content: 48.75

Gene sequence:

>1161_bases
ATGACCGGGCGGGCTTTGTTTTTTCAAAGGCTGTTTCATTATTGGCGGTATCAATGGAAGGTGTTTCAGACGGTCATTGA
TTGGACGGTCGCGCTGTATATCGTTCTTCCCGCTGCCGCATTTGCCGTTTATCAATATGCTGAATGGCTGAACGGCAGGG
GGCTTCTTAATGGAGCGGCAGGAGTATTAGGATGGGGCTGGCTGTATGTATTCAGTGCCCTGCTGTTGTGCACGGGTTTT
ATTCATACCTTTTTGCTGGAAGCGGATCACGTATTTTTGGTGCATGCAAAACATCTGATGCAAAAGCTGAAACGGTACGC
GCTTTTGTATTCGATGTTCCTTTCCCTTATCAAATGGGGTGCGCTTGCCGTATTGTTATTTCCCTTATGGCGCCAATACG
GTGACTGTACCTTACCGGCATATTCGGGTATGTTTTGCTGTCTGTTCGGCTTCCATACTGCAATATTAGCGGTGCACCGA
CACAGAAAAAACAGCAGGCGGACATTCGGGAATCAGGCGGCAGGCTGGCTGAAAGTGATGGTTCTGATGGCGGGTGCGTT
TTTTATGATCGTCTTTGCCGCCGAATGGTATTGGCTTTGGCCGGCGGGATGTATATTGTTCATCTGTTCCGCTTTTTTGA
CTTGGAAAGGGACGGAGACATTATCGGCCTTTGAGGAAGAAGTGCTTGAGGAGAACAGGCGCAAGCTTTCATTCGCGGCC
TCTGTTTTGATGCTCAGCCATGATGTGCAGCTCCCGAATGGTAAACATAAAGGGCGGAGCAAGCCGTTTTTATATCCCGG
CTCAAAGCACATCTTTACAAAACGGTCGGCGTATACGGCGTGGAAAGAATTGTTCTTTAAAGTGCTGATCCGAAACGGCG
GGTATATCCGGCAGCTTTACCTTTTAACCGCGGCTTTTACGGCTCTTATTCTCGTTCTTCCGCTCTTAGTGAAGCCGGCA
GTCCTCATTTTGTTTGCGATCGTCAGCCGCTATGCCGCGTCGCTTTTATTTGACCGGATCACGGACAAACCGGTTTTAAG
CGGTATCAAGAGAGACAGTGATGACTATTTCAGGGCGCGAAACAGCGCATTAACCGTCATTCAAGTCATCTGTTCCGTCT
GGTGTCTCATTGCCGCGATTCTTTCCGTTCTTTATATGTGA

Upstream 100 bases:

>100_bases
GCGCTCTGCTTCTTCAAGGCACGTTAGAGGAGCTTCAGGAAAAAACGGGGAGCCGTTCACTGCTGGATTGCTTTTATTCA
GCGGTTCGGAGCAGTCAGCG

Downstream 100 bases:

>100_bases
AAAATCCCTTTCCGAAAAAGGAAAGGGATTTTTCTTAATGACCGTTCAAAATAAAAAGCTGAATAAAAAACAGCACGGCG
AAGATGATGACTAAAGGATG

Product: YthQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTGRALFFQRLFHYWRYQWKVFQTVIDWTVALYIVLPAAAFAVYQYAEWLNGRGLLNGAAGVLGWGWLYVFSALLLCTGF
IHTFLLEADHVFLVHAKHLMQKLKRYALLYSMFLSLIKWGALAVLLFPLWRQYGDCTLPAYSGMFCCLFGFHTAILAVHR
HRKNSRRTFGNQAAGWLKVMVLMAGAFFMIVFAAEWYWLWPAGCILFICSAFLTWKGTETLSAFEEEVLEENRRKLSFAA
SVLMLSHDVQLPNGKHKGRSKPFLYPGSKHIFTKRSAYTAWKELFFKVLIRNGGYIRQLYLLTAAFTALILVLPLLVKPA
VLILFAIVSRYAASLLFDRITDKPVLSGIKRDSDDYFRARNSALTVIQVICSVWCLIAAILSVLYM

Sequences:

>Translated_386_residues
MTGRALFFQRLFHYWRYQWKVFQTVIDWTVALYIVLPAAAFAVYQYAEWLNGRGLLNGAAGVLGWGWLYVFSALLLCTGF
IHTFLLEADHVFLVHAKHLMQKLKRYALLYSMFLSLIKWGALAVLLFPLWRQYGDCTLPAYSGMFCCLFGFHTAILAVHR
HRKNSRRTFGNQAAGWLKVMVLMAGAFFMIVFAAEWYWLWPAGCILFICSAFLTWKGTETLSAFEEEVLEENRRKLSFAA
SVLMLSHDVQLPNGKHKGRSKPFLYPGSKHIFTKRSAYTAWKELFFKVLIRNGGYIRQLYLLTAAFTALILVLPLLVKPA
VLILFAIVSRYAASLLFDRITDKPVLSGIKRDSDDYFRARNSALTVIQVICSVWCLIAAILSVLYM
>Mature_385_residues
TGRALFFQRLFHYWRYQWKVFQTVIDWTVALYIVLPAAAFAVYQYAEWLNGRGLLNGAAGVLGWGWLYVFSALLLCTGFI
HTFLLEADHVFLVHAKHLMQKLKRYALLYSMFLSLIKWGALAVLLFPLWRQYGDCTLPAYSGMFCCLFGFHTAILAVHRH
RKNSRRTFGNQAAGWLKVMVLMAGAFFMIVFAAEWYWLWPAGCILFICSAFLTWKGTETLSAFEEEVLEENRRKLSFAAS
VLMLSHDVQLPNGKHKGRSKPFLYPGSKHIFTKRSAYTAWKELFFKVLIRNGGYIRQLYLLTAAFTALILVLPLLVKPAV
LILFAIVSRYAASLLFDRITDKPVLSGIKRDSDDYFRARNSALTVIQVICSVWCLIAAILSVLYM

Specific function: Unknown

COG id: COG4473

COG function: function code U; Predicted ABC-type exoprotein transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010288 [H]

Pfam domain/function: PF05975 EcsB [H]

EC number: NA

Molecular weight: Translated: 44260; Mature: 44129

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGRALFFQRLFHYWRYQWKVFQTVIDWTVALYIVLPAAAFAVYQYAEWLNGRGLLNGAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
GVLGWGWLYVFSALLLCTGFIHTFLLEADHVFLVHAKHLMQKLKRYALLYSMFLSLIKWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAVLLFPLWRQYGDCTLPAYSGMFCCLFGFHTAILAVHRHRKNSRRTFGNQAAGWLKVM
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VLMAGAFFMIVFAAEWYWLWPAGCILFICSAFLTWKGTETLSAFEEEVLEENRRKLSFAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SVLMLSHDVQLPNGKHKGRSKPFLYPGSKHIFTKRSAYTAWKELFFKVLIRNGGYIRQLY
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHH
LLTAAFTALILVLPLLVKPAVLILFAIVSRYAASLLFDRITDKPVLSGIKRDSDDYFRAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHH
NSALTVIQVICSVWCLIAAILSVLYM
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]