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The map label for this gene is ytoP [H]

Identifier: 154687125

GI number: 154687125

Start: 2822419

End: 2823492

Strand: Reverse

Name: ytoP [H]

Synonym: RBAM_026970

Alternate gene names: 154687125

Gene position: 2823492-2822419 (Counterclockwise)

Preceding gene: 154687127

Following gene: 154687123

Centisome position: 72.05

GC content: 54.1

Gene sequence:

>1074_bases
ATGAATGAGGAAACGAAAACGCTTTTCCGGACGCTGACGCAGCTTCCCGGCGCACCGGGAAATGAACATCAGGTCCGCTC
CTTTATGAAACGGGAGCTTGCGAAATATGCGGATGACATCGTGCAGGACAGACTCGGAAGTGTTTTCGGAGTAAGGCGCG
GCGCTGAAGATGCGCCGACCGTTATGGTAGCCGGCCATATGGACGAAGTGGGGTTTATGGTAACGCAGATTACGGATAAC
GGCATGCTGAGATTTCAGACGCTCGGCGGCTGGTGGAGTCAGGTGCTGCTTGCCCAGCGCGTCGAGGTGCAGACGGATAA
CGGACCGATTATCGGCGTCATCTCAAGCATCCCGCCCCACATTTTAACAGATGCCCAGCGCGCAAAGCCGATGGAGATCA
AAAATATGATGATTGATATCGGTGCCGATGACAGAGAGGACGCGGTCAAAATGGGGATCAGACCGGGACAGCAGGTCGTG
CCTGTCTGCCCGTTCACCCCGATGGCCAACGAGAAGAAAATATTGTCCAAAGCGTGGGATAACCGCTACGGCTGCGGGTT
AAGCATTGAACTATTAAAAGAGCTGCACGGAAAAGACCTGCCGAACAATCTGTACGCCGGGGCCACCGTTCAGGAGGAAG
TCGGTTTGAGAGGGGCGCAGACAGCGGCCAACATGATTCAGCCTGATCTCTTTTTCGCGCTTGATGCCAGCCCGGCAAAT
GATATGAGCGGCGATAAGGAGCTGTTCGGCCGTCTCGGCGAGGGGGTGCTGCTCCGCATTCTCGACAGAACGACGGTCAT
GCACCGCGGGATGAGAGAGTTCGTCCTTGATATGGCGGAAACGCACAATATCCCTTATCAATATTTCGCTTCAGGCGGGG
GAACGGATGCCGGACGGGTCCACATATCAAACAGCGGGGTTCCGTCTGCCGTCATCGGCATTTGTTCAAGATACATTCAT
ACAAATGCCGCCATCATTCATGTCGATGATTATGCCGCGGCGAAAGAAATGCTCATTAAGCTGGTCATGGCGAGTGACAA
ACAGACGGTCGAAACGATCAGAGAAAATGTGTAA

Upstream 100 bases:

>100_bases
TAAGTAAAGCGGCGGTTTTCCAGCCCATTCAATCTGAGCGCTTGGAAAACGGTTGTTTTTCTAATAAAATAAAAGCATTA
CATAGAAATGAGGGGAAAAT

Downstream 100 bases:

>100_bases
AAAAATAAGCAGGACCGCATAAAGGCGGCCTGCTTATTCTGTTTCAAATAAATAAGAGAGTGCTTTCATCGCTTGATTGA
CGGTTTCGACCGTGATATTC

Product: YtoP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNEETKTLFRTLTQLPGAPGNEHQVRSFMKRELAKYADDIVQDRLGSVFGVRRGAEDAPTVMVAGHMDEVGFMVTQITDN
GMLRFQTLGGWWSQVLLAQRVEVQTDNGPIIGVISSIPPHILTDAQRAKPMEIKNMMIDIGADDREDAVKMGIRPGQQVV
PVCPFTPMANEKKILSKAWDNRYGCGLSIELLKELHGKDLPNNLYAGATVQEEVGLRGAQTAANMIQPDLFFALDASPAN
DMSGDKELFGRLGEGVLLRILDRTTVMHRGMREFVLDMAETHNIPYQYFASGGGTDAGRVHISNSGVPSAVIGICSRYIH
TNAAIIHVDDYAAAKEMLIKLVMASDKQTVETIRENV

Sequences:

>Translated_357_residues
MNEETKTLFRTLTQLPGAPGNEHQVRSFMKRELAKYADDIVQDRLGSVFGVRRGAEDAPTVMVAGHMDEVGFMVTQITDN
GMLRFQTLGGWWSQVLLAQRVEVQTDNGPIIGVISSIPPHILTDAQRAKPMEIKNMMIDIGADDREDAVKMGIRPGQQVV
PVCPFTPMANEKKILSKAWDNRYGCGLSIELLKELHGKDLPNNLYAGATVQEEVGLRGAQTAANMIQPDLFFALDASPAN
DMSGDKELFGRLGEGVLLRILDRTTVMHRGMREFVLDMAETHNIPYQYFASGGGTDAGRVHISNSGVPSAVIGICSRYIH
TNAAIIHVDDYAAAKEMLIKLVMASDKQTVETIRENV
>Mature_357_residues
MNEETKTLFRTLTQLPGAPGNEHQVRSFMKRELAKYADDIVQDRLGSVFGVRRGAEDAPTVMVAGHMDEVGFMVTQITDN
GMLRFQTLGGWWSQVLLAQRVEVQTDNGPIIGVISSIPPHILTDAQRAKPMEIKNMMIDIGADDREDAVKMGIRPGQQVV
PVCPFTPMANEKKILSKAWDNRYGCGLSIELLKELHGKDLPNNLYAGATVQEEVGLRGAQTAANMIQPDLFFALDASPAN
DMSGDKELFGRLGEGVLLRILDRTTVMHRGMREFVLDMAETHNIPYQYFASGGGTDAGRVHISNSGVPSAVIGICSRYIH
TNAAIIHVDDYAAAKEMLIKLVMASDKQTVETIRENV

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=330, Percent_Identity=37.8787878787879, Blast_Score=222, Evalue=3e-59,
Organism=Escherichia coli, GI1788727, Length=346, Percent_Identity=31.2138728323699, Blast_Score=161, Evalue=5e-41,
Organism=Escherichia coli, GI87082417, Length=348, Percent_Identity=32.183908045977, Blast_Score=155, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 39253; Mature: 39253

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEETKTLFRTLTQLPGAPGNEHQVRSFMKRELAKYADDIVQDRLGSVFGVRRGAEDAPT
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VMVAGHMDEVGFMVTQITDNGMLRFQTLGGWWSQVLLAQRVEVQTDNGPIIGVISSIPPH
EEEECCCHHHCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCEEEECCCCCCH
ILTDAQRAKPMEIKNMMIDIGADDREDAVKMGIRPGQQVVPVCPFTPMANEKKILSKAWD
HHCCHHHCCCHHHHHEEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHC
NRYGCGLSIELLKELHGKDLPNNLYAGATVQEEVGLRGAQTAANMIQPDLFFALDASPAN
CCCCCCCHHHHHHHHCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHCCCCEEEEECCCCCC
DMSGDKELFGRLGEGVLLRILDRTTVMHRGMREFVLDMAETHNIPYQYFASGGGTDAGRV
CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEE
HISNSGVPSAVIGICSRYIHTNAAIIHVDDYAAAKEMLIKLVMASDKQTVETIRENV
EECCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MNEETKTLFRTLTQLPGAPGNEHQVRSFMKRELAKYADDIVQDRLGSVFGVRRGAEDAPT
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VMVAGHMDEVGFMVTQITDNGMLRFQTLGGWWSQVLLAQRVEVQTDNGPIIGVISSIPPH
EEEECCCHHHCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCEEEECCCCCCH
ILTDAQRAKPMEIKNMMIDIGADDREDAVKMGIRPGQQVVPVCPFTPMANEKKILSKAWD
HHCCHHHCCCHHHHHEEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHC
NRYGCGLSIELLKELHGKDLPNNLYAGATVQEEVGLRGAQTAANMIQPDLFFALDASPAN
CCCCCCCHHHHHHHHCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHCCCCEEEEECCCCCC
DMSGDKELFGRLGEGVLLRILDRTTVMHRGMREFVLDMAETHNIPYQYFASGGGTDAGRV
CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEE
HISNSGVPSAVIGICSRYIHTNAAIIHVDDYAAAKEMLIKLVMASDKQTVETIRENV
EECCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]