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The map label for this gene is ytcJ [H]

Identifier: 154687076

GI number: 154687076

Start: 2774789

End: 2776384

Strand: Reverse

Name: ytcJ [H]

Synonym: RBAM_026480

Alternate gene names: 154687076

Gene position: 2776384-2774789 (Counterclockwise)

Preceding gene: 154687077

Following gene: 154687074

Centisome position: 70.85

GC content: 54.76

Gene sequence:

>1596_bases
ATGAAAGCGATTTGGCACGGCGGCACCATCTATACAATGCTGGACAAGAATCATGTCACTGAAGCCATTTATACCGAAGA
AGGCGTCGTCAGGCAGACGGGCAGCTTCCGGGAGCTCCAAGGAACATACGGTTCGCCTGATACGGAGGAAATCGATTTAC
ATGGGGCTGTCATGTTCCCGGGGTTTACGGACAGTCATATGCATTTAATCGGACACGGGGAAAAACAGCTTCGCCTCGAT
TTGTCGCAGCTGACGTCAAAAGAAGCGATACTGCGGGCCGCAAAAGAAGCAGAGCGTGAATTGGAAGATGGCGAATGGCT
GATCGGCGAAGGCTGGGATGAAAATCTGTTTGAACAGCCGGATTACGTCACGAAGCATGACCTTGACCCGCTCTTTCCCG
ACCGCCCCGTCCTGCTGAAGCGGGTATGCCGGCACGCCGCGGCGGTTAATTCGGCCGCATTGCGCGCGGCGGGAATTACA
AACGAAACACCTGATCCAAACGGCGGGATTATCGTCCGGGACGGCACCGGTCCGACAGGCCTTCTGCTGGATAAAGCCCA
AGAGCTTGTGACACAGGCCCTGCCGCCCGTCTCACTTCACTATGTCAAACGCGCGCTTCAAACGGCGATTACGGACTGCT
GGTCAAAAGGCCTGACAGGCGGGCATTCAGAAGATCTGGCATACTACGGAGACGCGTCCGTTCCCGTTGCCGCGTACGAG
TCATTAACCGGCAGCGGCCTTTATCCTTTTCGCGCCCATCTGCTCGTACATCACGAAGCCGTCGACAGCTGGAGCGCTCT
GGATAAATCGACTGGACCTTATCTGGAATACGGAGCGATGAAAATTTTTGCTGACGGCGCGCTCGGAGGCAGAACCGCTC
TATTGAAAAAGCCTTACCATGATGATCCGTCTGTTTCCGGCGTTCAGGTGCATGATGACGAAACACTTGCCGCTCTTGTT
TATAAAGCGAGAGAGAAAGGGATGGAGATCGCCGTGCACGCGATTGGCGACCTTGCATTTGAAAAGGTGCTGGATGTTAT
CGAAAGATACCCGGCAAAGCCCGGACAGCTTGACCGGCTCATTCATGCGCAAGTATTAGATGACGGATTGATTGAGAGAG
CCGCCCGGCTGCCGATCGGACTTGATCTTCAGCCGCATTTTGTGGCCAGTGATTTTCCGTGGGTGATTGACAGGCTCGGA
GAAGAGCGGATGAAAACGGCTTTCGCCTGGAAAACACTGCTGTCAAAAGGGCTGCTGTGCGCCGGAGGTTCAGATGCCCC
GATAGAACCGGCCGATCCGCTTCTGGGTATTCAATCGGCTGTGCTCCGTACGAGCAAACAGCACCCGGAAGGTCCGGCCT
ATTATGAAAAAGAGTGCCTGACCGTGTACGAAGCCATTCAGCTTTACACGGAGGGAAGCGCGGCCATCATCCATAAAGAA
CATAGCCGCGGACGGATCGCCCCCGGCTATGATGCCGACTTTACCGTACTCAGCGGTGATCCGTTCAGGACGGACCCGAA
AAAGCTTCATGAATTGGAAGCTGTCAAAACCGTCGTCGGCGGCCGTATCGTATATGAAAAAGAGGACAGGCAGTGA

Upstream 100 bases:

>100_bases
AAACGGCGTCCGCAAAAATCAGACGTGTGGAGCTGAGACAGCGTGAAGAACGGCTGAAGGCTGATAAAAAAGCATAATAC
AGGATAAAGGGTGAGCGGGG

Downstream 100 bases:

>100_bases
TGCCCGTCCTCTTTTTTTATGATAAAAATGATCGTTTTACTTTTTCCCAGAAAGAGTTGTCTTTCAGTTTCACCGTTTTG
ATTTTTTTATCGGATAGTCT

Product: YtcJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MKAIWHGGTIYTMLDKNHVTEAIYTEEGVVRQTGSFRELQGTYGSPDTEEIDLHGAVMFPGFTDSHMHLIGHGEKQLRLD
LSQLTSKEAILRAAKEAERELEDGEWLIGEGWDENLFEQPDYVTKHDLDPLFPDRPVLLKRVCRHAAAVNSAALRAAGIT
NETPDPNGGIIVRDGTGPTGLLLDKAQELVTQALPPVSLHYVKRALQTAITDCWSKGLTGGHSEDLAYYGDASVPVAAYE
SLTGSGLYPFRAHLLVHHEAVDSWSALDKSTGPYLEYGAMKIFADGALGGRTALLKKPYHDDPSVSGVQVHDDETLAALV
YKAREKGMEIAVHAIGDLAFEKVLDVIERYPAKPGQLDRLIHAQVLDDGLIERAARLPIGLDLQPHFVASDFPWVIDRLG
EERMKTAFAWKTLLSKGLLCAGGSDAPIEPADPLLGIQSAVLRTSKQHPEGPAYYEKECLTVYEAIQLYTEGSAAIIHKE
HSRGRIAPGYDADFTVLSGDPFRTDPKKLHELEAVKTVVGGRIVYEKEDRQ

Sequences:

>Translated_531_residues
MKAIWHGGTIYTMLDKNHVTEAIYTEEGVVRQTGSFRELQGTYGSPDTEEIDLHGAVMFPGFTDSHMHLIGHGEKQLRLD
LSQLTSKEAILRAAKEAERELEDGEWLIGEGWDENLFEQPDYVTKHDLDPLFPDRPVLLKRVCRHAAAVNSAALRAAGIT
NETPDPNGGIIVRDGTGPTGLLLDKAQELVTQALPPVSLHYVKRALQTAITDCWSKGLTGGHSEDLAYYGDASVPVAAYE
SLTGSGLYPFRAHLLVHHEAVDSWSALDKSTGPYLEYGAMKIFADGALGGRTALLKKPYHDDPSVSGVQVHDDETLAALV
YKAREKGMEIAVHAIGDLAFEKVLDVIERYPAKPGQLDRLIHAQVLDDGLIERAARLPIGLDLQPHFVASDFPWVIDRLG
EERMKTAFAWKTLLSKGLLCAGGSDAPIEPADPLLGIQSAVLRTSKQHPEGPAYYEKECLTVYEAIQLYTEGSAAIIHKE
HSRGRIAPGYDADFTVLSGDPFRTDPKKLHELEAVKTVVGGRIVYEKEDRQ
>Mature_531_residues
MKAIWHGGTIYTMLDKNHVTEAIYTEEGVVRQTGSFRELQGTYGSPDTEEIDLHGAVMFPGFTDSHMHLIGHGEKQLRLD
LSQLTSKEAILRAAKEAERELEDGEWLIGEGWDENLFEQPDYVTKHDLDPLFPDRPVLLKRVCRHAAAVNSAALRAAGIT
NETPDPNGGIIVRDGTGPTGLLLDKAQELVTQALPPVSLHYVKRALQTAITDCWSKGLTGGHSEDLAYYGDASVPVAAYE
SLTGSGLYPFRAHLLVHHEAVDSWSALDKSTGPYLEYGAMKIFADGALGGRTALLKKPYHDDPSVSGVQVHDDETLAALV
YKAREKGMEIAVHAIGDLAFEKVLDVIERYPAKPGQLDRLIHAQVLDDGLIERAARLPIGLDLQPHFVASDFPWVIDRLG
EERMKTAFAWKTLLSKGLLCAGGSDAPIEPADPLLGIQSAVLRTSKQHPEGPAYYEKECLTVYEAIQLYTEGSAAIIHKE
HSRGRIAPGYDADFTVLSGDPFRTDPKKLHELEAVKTVVGGRIVYEKEDRQ

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 58322; Mature: 58322

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIWHGGTIYTMLDKNHVTEAIYTEEGVVRQTGSFRELQGTYGSPDTEEIDLHGAVMFP
CCEEEECCEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCEEEECEEEEEC
GFTDSHMHLIGHGEKQLRLDLSQLTSKEAILRAAKEAERELEDGEWLIGEGWDENLFEQP
CCCCCCEEEEECCCHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHCCC
DYVTKHDLDPLFPDRPVLLKRVCRHAAAVNSAALRAAGITNETPDPNGGIIVRDGTGPTG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCH
LLLDKAQELVTQALPPVSLHYVKRALQTAITDCWSKGLTGGHSEDLAYYGDASVPVAAYE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHH
SLTGSGLYPFRAHLLVHHEAVDSWSALDKSTGPYLEYGAMKIFADGALGGRTALLKKPYH
HCCCCCCCHHHHEEEEEHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCCCHHHHCCCCC
DDPSVSGVQVHDDETLAALVYKAREKGMEIAVHAIGDLAFEKVLDVIERYPAKPGQLDRL
CCCCCCCEEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHH
IHAQVLDDGLIERAARLPIGLDLQPHFVASDFPWVIDRLGEERMKTAFAWKTLLSKGLLC
HHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
AGGSDAPIEPADPLLGIQSAVLRTSKQHPEGPAYYEKECLTVYEAIQLYTEGSAAIIHKE
ECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
HSRGRIAPGYDADFTVLSGDPFRTDPKKLHELEAVKTVVGGRIVYEKEDRQ
CCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCC
>Mature Secondary Structure
MKAIWHGGTIYTMLDKNHVTEAIYTEEGVVRQTGSFRELQGTYGSPDTEEIDLHGAVMFP
CCEEEECCEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCEEEECEEEEEC
GFTDSHMHLIGHGEKQLRLDLSQLTSKEAILRAAKEAERELEDGEWLIGEGWDENLFEQP
CCCCCCEEEEECCCHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHCCC
DYVTKHDLDPLFPDRPVLLKRVCRHAAAVNSAALRAAGITNETPDPNGGIIVRDGTGPTG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCH
LLLDKAQELVTQALPPVSLHYVKRALQTAITDCWSKGLTGGHSEDLAYYGDASVPVAAYE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHH
SLTGSGLYPFRAHLLVHHEAVDSWSALDKSTGPYLEYGAMKIFADGALGGRTALLKKPYH
HCCCCCCCHHHHEEEEEHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCCCHHHHCCCCC
DDPSVSGVQVHDDETLAALVYKAREKGMEIAVHAIGDLAFEKVLDVIERYPAKPGQLDRL
CCCCCCCEEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHH
IHAQVLDDGLIERAARLPIGLDLQPHFVASDFPWVIDRLGEERMKTAFAWKTLLSKGLLC
HHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
AGGSDAPIEPADPLLGIQSAVLRTSKQHPEGPAYYEKECLTVYEAIQLYTEGSAAIIHKE
ECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
HSRGRIAPGYDADFTVLSGDPFRTDPKKLHELEAVKTVVGGRIVYEKEDRQ
CCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]