| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is ytfJ [H]
Identifier: 154687071
GI number: 154687071
Start: 2771052
End: 2771492
Strand: Reverse
Name: ytfJ [H]
Synonym: RBAM_026430
Alternate gene names: 154687071
Gene position: 2771492-2771052 (Counterclockwise)
Preceding gene: 154687072
Following gene: 154687070
Centisome position: 70.73
GC content: 46.26
Gene sequence:
>441_bases ATGGCAGACCATCCCATTCAAGGTTTAATGAAAACCGCTATGGAAAATTTAAAAGAAATGATTGACGTGAATACAATCAT CGGCGATCCTGTTGAAACGCCTGACGGCAGCGTAATCTTAACGGTTTCAAAGGTCGGCTTCGGATTTGCGGCCGGCGGAA GCGAGTTTGGAGGAAAGCCGGCTGAAAAAAGAACCGATGATGATGAAAGAAAAGAGCAGAAGCTCCCGTTCGGCGGCGGA AGCGGCGGCGGAGTATCCATTACGCCGATTGCGTTTCTGATCGTCGGAACAAACGGCGTGCGCATGCTTCATTTAGACGA AAACACCCATCTGATTGATAAACTGTTAGATTCCGCGCCTCAAACGATTGAACGCATCCAGCATATGTTTAAAAAGAATG AAAAAGGCCGGAACCAAAAAAGAACGGATATCGATTTATAA
Upstream 100 bases:
>100_bases ATTGCTCAAATACGGGCGGAACGGACTTTCTATCATACGAAAGAAACAGCCGGTTCCGGTTGCTTCAAAGAATGATTCAT CAGTTTAAGGAGGAGCGCAT
Downstream 100 bases:
>100_bases CAGAAAAGTTAACTGCCGCCCGCAGTTAACTTTTTTTACGATGCGGCATAACCTTTGCAGTTTGCATAAAACTCGACTAT GATAGAGCTATACATAGATA
Product: YtfJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFAAGGSEFGGKPAEKRTDDDERKEQKLPFGGG SGGGVSITPIAFLIVGTNGVRMLHLDENTHLIDKLLDSAPQTIERIQHMFKKNEKGRNQKRTDIDL
Sequences:
>Translated_146_residues MADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFAAGGSEFGGKPAEKRTDDDERKEQKLPFGGG SGGGVSITPIAFLIVGTNGVRMLHLDENTHLIDKLLDSAPQTIERIQHMFKKNEKGRNQKRTDIDL >Mature_145_residues ADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFAAGGSEFGGKPAEKRTDDDERKEQKLPFGGGS GGGVSITPIAFLIVGTNGVRMLHLDENTHLIDKLLDSAPQTIERIQHMFKKNEKGRNQKRTDIDL
Specific function: Unknown
COG id: COG3874
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Spore core (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014229 [H]
Pfam domain/function: PF09579 Spore_YtfJ [H]
EC number: NA
Molecular weight: Translated: 15843; Mature: 15712
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFAAGGSEFGGKP CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCC AEKRTDDDERKEQKLPFGGGSGGGVSITPIAFLIVGTNGVRMLHLDENTHLIDKLLDSAP CCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHCCH QTIERIQHMFKKNEKGRNQKRTDIDL HHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFAAGGSEFGGKP CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCC AEKRTDDDERKEQKLPFGGGSGGGVSITPIAFLIVGTNGVRMLHLDENTHLIDKLLDSAP CCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHCCH QTIERIQHMFKKNEKGRNQKRTDIDL HHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]