| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is ytxK [H]
Identifier: 154687069
GI number: 154687069
Start: 2769385
End: 2770371
Strand: Reverse
Name: ytxK [H]
Synonym: RBAM_026410
Alternate gene names: 154687069
Gene position: 2770371-2769385 (Counterclockwise)
Preceding gene: 154687070
Following gene: 154687068
Centisome position: 70.7
GC content: 47.92
Gene sequence:
>987_bases ATGCAACACGACCATGTCGGTCAGATTTATGAACTTTTAGATGAAGCTGCCCAAGTGATAGCAGAAGGCCTTCAGATTTC TTATATTGAGGGGCTTGCGGAAGCGGGAGAAATGTATTTTCTTGAAAAGGCCGACCAGCTTCCGCTTCAGGAAAAGCAAA TCGGCGAGCTTAACAGCCTGCTTGCGAAAGCAGACTTCAGAAAATGGGAGCATGAATGGATCCGCAAGGCGTTCCAGCTC GCCATTTTAAAAGGGCTGAAAGATAAGTCCCATCCGAACAGACAGATGACGCCTGATACGATCGGCATTTTCATCAGTTA CCTCGTGAATAAATTTACGGGCGGCCGAAAAGGCCTGACATTGCTGGACCCCGCCTGCGGCACCGGAAATCTTCTGCTGA CCGCGGCAAACCAGCTTTCTGACAAAGCGGCAAAAAGCTTCGGCATTGAAATCGACGATGTCCTTCTGAAGATCGCTTAT GCTCAGGCGAATCTGCAGGAAAAAGAAATGGAGCTGTTCTGCCAGGACAGTCTTCAGCCGTTATTTATCGAACCGGCCGA TGCGGTCATCTGCGATTTGCCGGTCGGCTACTATCCGAATGACGAAGGCGCTGAAGCGTTTGAGCTGAAAGCGGATGAAG GCCACTCTTTTGCACACCACTTATTTATTGAGCAGAGCGTCAAACATACAAAACCGGGCGGATACTTATTTTTTATGATT CCGAACCATCTGTTTGACAGCGCGCAAAGCGATAAACTGAAGCGGTTTTTTGCGGAAAAAGTGTATATCAACGCCCTTCT TCAGCTGCCGGCTACTATGTTTAAAGACGAAGCGCAGGCAAAGAGCATTTTAATCTTGCAGAAAAAAGGCGAAGACGCAA AGCCGCCGAAACAAGCGCTTTTGGCGAATCTTCCTTCTTTTGCGAACCAGCAGGCGATGCGGGAGATGACGGCAAAATTG GATCAATGGATTCAAAAAGAAAAATAA
Upstream 100 bases:
>100_bases GAAAAGCCTATCGAAGCTGCAAAAGCGTTAATCAAGTAAAGAGAGAAAAAGAGCTCCGGGTGCTGCCGCGGAGCTCTTTT CATGGCAAGGAGGAAACAGC
Downstream 100 bases:
>100_bases TGGCGAAAAAGCAGTGTGAGATGCAAAATCCCGCGCTGCTTTTGCTTTTTAAAATGAATGGAAATCAGGACGATAACACA AATTAAGGAAAGAAAATAAC
Product: YtxK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MQHDHVGQIYELLDEAAQVIAEGLQISYIEGLAEAGEMYFLEKADQLPLQEKQIGELNSLLAKADFRKWEHEWIRKAFQL AILKGLKDKSHPNRQMTPDTIGIFISYLVNKFTGGRKGLTLLDPACGTGNLLLTAANQLSDKAAKSFGIEIDDVLLKIAY AQANLQEKEMELFCQDSLQPLFIEPADAVICDLPVGYYPNDEGAEAFELKADEGHSFAHHLFIEQSVKHTKPGGYLFFMI PNHLFDSAQSDKLKRFFAEKVYINALLQLPATMFKDEAQAKSILILQKKGEDAKPPKQALLANLPSFANQQAMREMTAKL DQWIQKEK
Sequences:
>Translated_328_residues MQHDHVGQIYELLDEAAQVIAEGLQISYIEGLAEAGEMYFLEKADQLPLQEKQIGELNSLLAKADFRKWEHEWIRKAFQL AILKGLKDKSHPNRQMTPDTIGIFISYLVNKFTGGRKGLTLLDPACGTGNLLLTAANQLSDKAAKSFGIEIDDVLLKIAY AQANLQEKEMELFCQDSLQPLFIEPADAVICDLPVGYYPNDEGAEAFELKADEGHSFAHHLFIEQSVKHTKPGGYLFFMI PNHLFDSAQSDKLKRFFAEKVYINALLQLPATMFKDEAQAKSILILQKKGEDAKPPKQALLANLPSFANQQAMREMTAKL DQWIQKEK >Mature_328_residues MQHDHVGQIYELLDEAAQVIAEGLQISYIEGLAEAGEMYFLEKADQLPLQEKQIGELNSLLAKADFRKWEHEWIRKAFQL AILKGLKDKSHPNRQMTPDTIGIFISYLVNKFTGGRKGLTLLDPACGTGNLLLTAANQLSDKAAKSFGIEIDDVLLKIAY AQANLQEKEMELFCQDSLQPLFIEPADAVICDLPVGYYPNDEGAEAFELKADEGHSFAHHLFIEQSVKHTKPGGYLFFMI PNHLFDSAQSDKLKRFFAEKVYINALLQLPATMFKDEAQAKSILILQKKGEDAKPPKQALLANLPSFANQQAMREMTAKL DQWIQKEK
Specific function: Unknown
COG id: COG0827
COG function: function code L; Adenine-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To type I restriction system adenine methylases [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003356 - InterPro: IPR002296 - InterPro: IPR016843 [H]
Pfam domain/function: PF02384 N6_Mtase [H]
EC number: NA
Molecular weight: Translated: 36898; Mature: 36898
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHDHVGQIYELLDEAAQVIAEGLQISYIEGLAEAGEMYFLEKADQLPLQEKQIGELNSL CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEHHHCCCCCCHHHHHHHHHH LAKADFRKWEHEWIRKAFQLAILKGLKDKSHPNRQMTPDTIGIFISYLVNKFTGGRKGLT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCE LLDPACGTGNLLLTAANQLSDKAAKSFGIEIDDVLLKIAYAQANLQEKEMELFCQDSLQP EECCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC LFIEPADAVICDLPVGYYPNDEGAEAFELKADEGHSFAHHLFIEQSVKHTKPGGYLFFMI EEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEC PNHLFDSAQSDKLKRFFAEKVYINALLQLPATMFKDEAQAKSILILQKKGEDAKPPKQAL CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHH LANLPSFANQQAMREMTAKLDQWIQKEK HHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQHDHVGQIYELLDEAAQVIAEGLQISYIEGLAEAGEMYFLEKADQLPLQEKQIGELNSL CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEHHHCCCCCCHHHHHHHHHH LAKADFRKWEHEWIRKAFQLAILKGLKDKSHPNRQMTPDTIGIFISYLVNKFTGGRKGLT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCE LLDPACGTGNLLLTAANQLSDKAAKSFGIEIDDVLLKIAYAQANLQEKEMELFCQDSLQP EECCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC LFIEPADAVICDLPVGYYPNDEGAEAFELKADEGHSFAHHLFIEQSVKHTKPGGYLFFMI EEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEC PNHLFDSAQSDKLKRFFAEKVYINALLQLPATMFKDEAQAKSILILQKKGEDAKPPKQAL CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHH LANLPSFANQQAMREMTAKLDQWIQKEK HHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 8226682 [H]