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The map label for this gene is ytqI [H]

Identifier: 154687059

GI number: 154687059

Start: 2759840

End: 2760781

Strand: Reverse

Name: ytqI [H]

Synonym: RBAM_026310

Alternate gene names: 154687059

Gene position: 2760781-2759840 (Counterclockwise)

Preceding gene: 154687061

Following gene: 154687056

Centisome position: 70.45

GC content: 47.24

Gene sequence:

>942_bases
ATGAAATCCGAACTGATCAGAACCATATCATTATATGACACCATTATCTTACATAGACATGTGAGGCCTGACCCGGACGC
CTACGGTTCACAGTGCGGCCTTACGGAAATCCTGCGGGAAACGTATCCCGAAAAAAATATTTTTGCCGTCGGACAGCCTG
AGCCGTCCTTGTCTTTTTTATATTCCCTCGATGAGGTGGATGACGAAACCTATAAAGATGCTCTTGTCATCGTGTGCGAC
ACCGCAAACCAAGGCAGGGTCGACGATCAGCGCTACCATTCCGGCGCAAAGCTCATGAAAATAGACCACCATCCAAATGA
AGATCCGTATGGCGATCTGTTATGGGTCGATACGAATGCAAGCTCCGTAAGCGAAATGATCTATGAGCTGTACCTGGAAG
GAAAGCAGCACGGCTGGAAACTGAATACGAAAGCAGCTGAGCTGATCTACGCGGGTATCGTCGGTGATACGGGGCGCTTC
TTATTCCCGAACACCACAAAAAAGACATTAAAATACGCGGGAGAGCTCATTGAGTTCCCATTTTCATCGTCAGAGCTGTT
CAATCAATTGTATGAAACAAAATTAAATGTGGTGAAGCTTAACGGCTTTATTTATCAAAATGTGTCACTGTCTGAAAACG
GCGTCGCTTCCGTGTTCATTAAAAAAGACATTTTGGAGACATATGGAACCACCGCTTCTGAAGCGTCGCAGCTTGTCGGA
ACACTCGGAAATATTTCGGGTATCCGCGCTTGGGTGTTTTTCGTAGAAGAAGACGATCAAATCAGAGTCCGGTTCCGTTC
AAAAGGTCCGGTCATCAACGGAATTGCCCGGAAATACAATGGCGGCGGACATCCGCTTGCGGCCGGCGCATCCATCTTCA
GCTGGGATGAAACCGATCAGATTCTTGCTGATCTGGAAGAGGTATGTAACGAACACAAGTAG

Upstream 100 bases:

>100_bases
TATATGAGTTTGCAAAACCGTTTATACCGTTGCTGAAAGATTTTCCTTTTCCATGGATAAAGAGTATGATTAAATGAATA
AAAACGAAAAGGAGAAAGCG

Downstream 100 bases:

>100_bases
AGGGGAGACCCTCTTTCTTAGTGTTCATCTGTCACGGGGATGAACCAGCAGCCGAAATCAGTCAGGTCTTCGTAGACGCG
GAGATTACAGATTTGGAGTT

Product: YtqI

Products: NA

Alternate protein names: 3'(2'),5'-bisphosphate nucleotidase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; nanoRNAse [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKSELIRTISLYDTIILHRHVRPDPDAYGSQCGLTEILRETYPEKNIFAVGQPEPSLSFLYSLDEVDDETYKDALVIVCD
TANQGRVDDQRYHSGAKLMKIDHHPNEDPYGDLLWVDTNASSVSEMIYELYLEGKQHGWKLNTKAAELIYAGIVGDTGRF
LFPNTTKKTLKYAGELIEFPFSSSELFNQLYETKLNVVKLNGFIYQNVSLSENGVASVFIKKDILETYGTTASEASQLVG
TLGNISGIRAWVFFVEEDDQIRVRFRSKGPVINGIARKYNGGGHPLAAGASIFSWDETDQILADLEEVCNEHK

Sequences:

>Translated_313_residues
MKSELIRTISLYDTIILHRHVRPDPDAYGSQCGLTEILRETYPEKNIFAVGQPEPSLSFLYSLDEVDDETYKDALVIVCD
TANQGRVDDQRYHSGAKLMKIDHHPNEDPYGDLLWVDTNASSVSEMIYELYLEGKQHGWKLNTKAAELIYAGIVGDTGRF
LFPNTTKKTLKYAGELIEFPFSSSELFNQLYETKLNVVKLNGFIYQNVSLSENGVASVFIKKDILETYGTTASEASQLVG
TLGNISGIRAWVFFVEEDDQIRVRFRSKGPVINGIARKYNGGGHPLAAGASIFSWDETDQILADLEEVCNEHK
>Mature_313_residues
MKSELIRTISLYDTIILHRHVRPDPDAYGSQCGLTEILRETYPEKNIFAVGQPEPSLSFLYSLDEVDDETYKDALVIVCD
TANQGRVDDQRYHSGAKLMKIDHHPNEDPYGDLLWVDTNASSVSEMIYELYLEGKQHGWKLNTKAAELIYAGIVGDTGRF
LFPNTTKKTLKYAGELIEFPFSSSELFNQLYETKLNVVKLNGFIYQNVSLSENGVASVFIKKDILETYGTTASEASQLVG
TLGNISGIRAWVFFVEEDDQIRVRFRSKGPVINGIARKYNGGGHPLAAGASIFSWDETDQILADLEEVCNEHK

Specific function: Bifunctional enzyme which has both oligoribonuclease and pAp-phosphatase activities. Degrades RNA oligonucleotides with a length of 5 nucleotides and shorter. Converts 3'(2')- phosphoadenosine 5'-phosphate (PAP) to AMP [H]

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: =3.1.3.7 [H]

Molecular weight: Translated: 35134; Mature: 35134

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSELIRTISLYDTIILHRHVRPDPDAYGSQCGLTEILRETYPEKNIFAVGQPEPSLSFL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHE
YSLDEVDDETYKDALVIVCDTANQGRVDDQRYHSGAKLMKIDHHPNEDPYGDLLWVDTNA
EEHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCEEEEECCH
SSVSEMIYELYLEGKQHGWKLNTKAAELIYAGIVGDTGRFLFPNTTKKTLKYAGELIEFP
HHHHHHHHHHHHCCCCCCEEECCHHHEEEEEEEECCCCCEECCCCHHHHHHHHHHHHCCC
FSSSELFNQLYETKLNVVKLNGFIYQNVSLSENGVASVFIKKDILETYGTTASEASQLVG
CCHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHH
TLGNISGIRAWVFFVEEDDQIRVRFRSKGPVINGIARKYNGGGHPLAAGASIFSWDETDQ
HHCCCCCEEEEEEEEECCCEEEEEEECCCCEEEHHHHHCCCCCCCCCCCCEEECCCCHHH
ILADLEEVCNEHK
HHHHHHHHHHCCC
>Mature Secondary Structure
MKSELIRTISLYDTIILHRHVRPDPDAYGSQCGLTEILRETYPEKNIFAVGQPEPSLSFL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHE
YSLDEVDDETYKDALVIVCDTANQGRVDDQRYHSGAKLMKIDHHPNEDPYGDLLWVDTNA
EEHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCEEEEECCH
SSVSEMIYELYLEGKQHGWKLNTKAAELIYAGIVGDTGRFLFPNTTKKTLKYAGELIEFP
HHHHHHHHHHHHCCCCCCEEECCHHHEEEEEEEECCCCCEECCCCHHHHHHHHHHHHCCC
FSSSELFNQLYETKLNVVKLNGFIYQNVSLSENGVASVFIKKDILETYGTTASEASQLVG
CCHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHH
TLGNISGIRAWVFFVEEDDQIRVRFRSKGPVINGIARKYNGGGHPLAAGASIFSWDETDQ
HHCCCCCEEEEEEEEECCCEEEEEEECCCCEEEHHHHHCCCCCCCCCCCCEEECCCCHHH
ILADLEEVCNEHK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]