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The map label for this gene is accD

Identifier: 154687054

GI number: 154687054

Start: 2752630

End: 2753502

Strand: Reverse

Name: accD

Synonym: RBAM_026260

Alternate gene names: 154687054

Gene position: 2753502-2752630 (Counterclockwise)

Preceding gene: 154687055

Following gene: 154687053

Centisome position: 70.27

GC content: 45.82

Gene sequence:

>873_bases
TTGTTAAAGGATATATTCACAAAAAAGAAAAAATATGCTTCCGTGCCGTCTGAGCAGGCAAAACATGATGTTCCGGAAGG
CATTATGACAAAGTGCCCCAAATGTAAAAAAATCATGCTCACAAAAGAGTTAGATAAAAACCTGCGCGTCTGCATGAACT
GCGGGCACCATTTCCCGATGAATGCAAAGCAGCGCATTGAAAGCCTCCTGGATGAAGATTCATTCGAAGAATTCAACCAG
GGAATGATATCTGAAAACCCGCTCGGTTTCCCGGAATACTTAGAAAAAATCGAAAAAGACCGTGAGAAAACATCGCTGAA
TGAAGCGGTGGTTACCGGAAAAGGAACCATCAGCGGATTCCCGGCCGTGATCGCGATCATGGATTCAACATTCCGAATGG
GCAGCATGGGTTCGGTTGTCGGCGAAAAAATCACGCTTGCAATTGAAAAAGCAAAAGAGGAAAAAGTCCCGTTTATCATC
TTTACCGCTTCCGGCGGAGCACGTATGCAGGAGGGGGTCTTAAGTCTTATGCAAATGGCAAAGACAAGCTCTGCATTAAA
ACTGTTCAGTGAGGAGCAGGGATTGATTATTTCTGTCATGACCCATCCGACGACAGGCGGTGTATCAGCCAGTTTCGCGT
CTCTCGGTGATTATAATTTTGCTGAACCGGGCACCTTGATCGGATTTGCCGGAAGACGTATTATTGAACAGACAATCGGG
GAAAAACTGCCGGAAGATTTCCAGACGGCGGAATTTTTATTAAAGCACGGCCAGCTTGATGCGGTGATTCACCGAAACGA
CATGAAAGACAAACTCGCATTTCTGCTGGACATGCACCAAACAGGAGGTGAGTATGAGTGGCTGCAAGATTAG

Upstream 100 bases:

>100_bases
TGACAAAAAAAGTACAATAGTTTCGGTAAAGTTATTATTAAGTCTATCTAATCGGAAGACATGCAGTGAAGAGAACCCTT
CACAAAAGGGAGGTAATCAT

Downstream 100 bases:

>100_bases
AATTTGAAAAACCAGTGATTGAACTGCAGACGAAAATCGCCGAACTGAAAAAATTCACCCAAGATTCGGAGATGGATTTA
AGCGCTGAAATCGCAAGGCT

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLKDIFTKKKKYASVPSEQAKHDVPEGIMTKCPKCKKIMLTKELDKNLRVCMNCGHHFPMNAKQRIESLLDEDSFEEFNQ
GMISENPLGFPEYLEKIEKDREKTSLNEAVVTGKGTISGFPAVIAIMDSTFRMGSMGSVVGEKITLAIEKAKEEKVPFII
FTASGGARMQEGVLSLMQMAKTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGTLIGFAGRRIIEQTIG
EKLPEDFQTAEFLLKHGQLDAVIHRNDMKDKLAFLLDMHQTGGEYEWLQD

Sequences:

>Translated_290_residues
MLKDIFTKKKKYASVPSEQAKHDVPEGIMTKCPKCKKIMLTKELDKNLRVCMNCGHHFPMNAKQRIESLLDEDSFEEFNQ
GMISENPLGFPEYLEKIEKDREKTSLNEAVVTGKGTISGFPAVIAIMDSTFRMGSMGSVVGEKITLAIEKAKEEKVPFII
FTASGGARMQEGVLSLMQMAKTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGTLIGFAGRRIIEQTIG
EKLPEDFQTAEFLLKHGQLDAVIHRNDMKDKLAFLLDMHQTGGEYEWLQD
>Mature_290_residues
MLKDIFTKKKKYASVPSEQAKHDVPEGIMTKCPKCKKIMLTKELDKNLRVCMNCGHHFPMNAKQRIESLLDEDSFEEFNQ
GMISENPLGFPEYLEKIEKDREKTSLNEAVVTGKGTISGFPAVIAIMDSTFRMGSMGSVVGEKITLAIEKAKEEKVPFII
FTASGGARMQEGVLSLMQMAKTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGTLIGFAGRRIIEQTIG
EKLPEDFQTAEFLLKHGQLDAVIHRNDMKDKLAFLLDMHQTGGEYEWLQD

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family

Homologues:

Organism=Escherichia coli, GI1788655, Length=259, Percent_Identity=48.6486486486487, Blast_Score=248, Evalue=4e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACCD_BACA2 (A7Z7K8)

Other databases:

- EMBL:   CP000560
- RefSeq:   YP_001422215.1
- ProteinModelPortal:   A7Z7K8
- SMR:   A7Z7K8
- STRING:   A7Z7K8
- EnsemblBacteria:   EBBACT00000007766
- GeneID:   5460686
- GenomeReviews:   CP000560_GR
- KEGG:   bay:RBAM_026260
- eggNOG:   COG0777
- GeneTree:   EBGT00050000000002
- HOGENOM:   HBG285696
- OMA:   LEHGMVD
- ProtClustDB:   PRK05654
- BioCyc:   BAMY326423:RBAM_026260-MONOMER
- HAMAP:   MF_01395
- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762
- PRINTS:   PR01070
- TIGRFAMs:   TIGR00515

Pfam domain/function: PF01039 Carboxyl_trans

EC number: =6.4.1.2

Molecular weight: Translated: 32225; Mature: 32225

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDIFTKKKKYASVPSEQAKHDVPEGIMTKCPKCKKIMLTKELDKNLRVCMNCGHHFPM
CCHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
NAKQRIESLLDEDSFEEFNQGMISENPLGFPEYLEKIEKDREKTSLNEAVVTGKGTISGF
CHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCH
PAVIAIMDSTFRMGSMGSVVGEKITLAIEKAKEEKVPFIIFTASGGARMQEGVLSLMQMA
HHHHHHHHHHHCCCCHHHHHHHHHHEEEEHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
KTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGTLIGFAGRRIIEQTIG
HHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHH
EKLPEDFQTAEFLLKHGQLDAVIHRNDMKDKLAFLLDMHQTGGEYEWLQD
HHCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLKDIFTKKKKYASVPSEQAKHDVPEGIMTKCPKCKKIMLTKELDKNLRVCMNCGHHFPM
CCHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
NAKQRIESLLDEDSFEEFNQGMISENPLGFPEYLEKIEKDREKTSLNEAVVTGKGTISGF
CHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCH
PAVIAIMDSTFRMGSMGSVVGEKITLAIEKAKEEKVPFIIFTASGGARMQEGVLSLMQMA
HHHHHHHHHHHCCCCHHHHHHHHHHEEEEHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
KTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGTLIGFAGRRIIEQTIG
HHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHH
EKLPEDFQTAEFLLKHGQLDAVIHRNDMKDKLAFLLDMHQTGGEYEWLQD
HHCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA