| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is pyk [H]
Identifier: 154687051
GI number: 154687051
Start: 2748720
End: 2750477
Strand: Reverse
Name: pyk [H]
Synonym: RBAM_026230
Alternate gene names: 154687051
Gene position: 2750477-2748720 (Counterclockwise)
Preceding gene: 154687052
Following gene: 154687050
Centisome position: 70.19
GC content: 49.6
Gene sequence:
>1758_bases TTGAAAAAAACAAAAATCGTTTGTACAATCGGTCCGGCCAGTGAAAGTGTAGAAATGCTGACAAAATTGATGGAAGCGGG TATGAACGTTGCTCGTCTGAATTTTTCACACGGTGATTTCGAAGAGCACGGCGCAAGAATCAAAAACATCAGAGAAGCAA GCAAAAAGCTCGGCAAAAACGTGGGGATTCTCCTCGATACGAAAGGTCCGGAAATCCGCACGCACGATATGGAAAACGGC GCGCTTGAGCTTCAGGCGGGAAATGAAATTATCGTTTCTACGAAACAGGTGCTGGGAACACTTGGAAAATTCTCAGTTTC TTATGAAGGCCTGGCAGACGACGTGTCAGCAGGGTCTATCATCCTGTTGGATGACGGTTTAATCGGATTGGAAGTGCTAG AATCAAATCCGGAAAAACACGAAATCAAAACAAAAATCTTAAACAGCGGCACGCTGAAAAATAAAAAAGGCGTAAACGTT CCCGGCGTCAGCGTCAACCTTCCCGGAATTACTGAAAAAGACGCCAAAGACATCGTATTCGGTATCGAGCAAGGCGTTGA TTTCATCGCTGCGTCATTTGTACGCCGTTCTACGGATGTCCTGGAAATCCGCGAACTGCTTGAAGAGCATAACGCGTCTG ACATTCAAATCATTCCTAAGATCGAGAACCAGGAAGGCGTGGACAACCTGGATGCGATCCTGGAAGTATCTGACGGCTTA ATGGTAGCGCGCGGAGACCTCGGCGTAGAGATTCCGGCCGAAGAAGTGCCGCTCGTGCAAAAAGAAATGATCAAAAAATG CAACGCGCTCGGCAAACCGGTTATTACTGCGACACAAATGCTTGACAGCATGCAGCGCAACCCTCGTCCGACACGCGCTG AAGCAAGTGACGTTGCCAACGCCATTTTCGACGGCACAGATGCTATCATGCTTTCCGGTGAGACGGCTGCGGGACAATAT CCTGTCGAGGCGGTTCAAACAATGTTTAACATCGCCACACGCACGGAAGAATCTCTGAACTACAAAGAAATTCTGTCTAA ACGCAGAGATCAGGTCGGCATGACGATTACCGATGCGATCGGCCAATCAGTTGCGCACACGGCGATCAATCTGAGTGCGG CAGCTATCGTTACGCCTACAGAAAGCGGCCATACGGCGCGTATGATCGCGAAATACCGTCCGCAGGCTCCGATTGTAGCC GTTACGGTTAATGAGTCTGTGTCACGCAAACTCGGCCTTGTATTCGGTGTATTCCCGTCAAGCGGCCAAAACGCGAATTC AACCGATGAAATGCTTGAAGACGCGGTTCAAAAATCACTTGACAGCGGCATCGTGAAACGCGGTGATCTGATTGTCATTA CAGCAGGTTCTGTCGGTGAATCAGGCACGACAAATCTGATGAAAGTCCACACTGTCGGCAGCATTATCGCGAAAGGGCAA GGCATCGGGCGCAAATCTGCATTCGGTCCGGTCGTTGTTGCAAAAAATGCGAAAGAAGCTGAACAAAAAATGACAGACGG CGCGGTATTGGTTGCCTCAAGCACTGACCGCGACATGATCGCTTCACTTGAAAAAGCATCAGCGCTCATCACTGAAGAAG GCGGTCTGACAAGCCATGCAGCCGTTGTCGGTTTAAGCTTGGGCATTCCGGTTATCGTCGGTCTGGAGAACGCAACTTCA GTTTTAACAGAAGGACAGGTTATCACAGTTGACGCTGCCCGCGGCGCTGTGTATGAAGGCCGCGCAAGCGTTCTTTAA
Upstream 100 bases:
>100_bases AGAATCAAAACATACTGTTGAACCAAACATGTATCAGCTTTCAAAAGAACTGTCTATTTAAGGCGGAAGAAGCTGAAGAT TTCAGAAGGAAGTGAACGAG
Downstream 100 bases:
>100_bases ACAGCTTTAAAAAAGAGAGGGGGGTTCTCCCTTCTCTTTTGTCTTTAGGCTGATTTTCCTATTCCCATGCGGGCGGTGAC GCGCTTTTAGAAGGGCAGGA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK; Vegetative protein 17; VEG17 [H]
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MKKTKIVCTIGPASESVEMLTKLMEAGMNVARLNFSHGDFEEHGARIKNIREASKKLGKNVGILLDTKGPEIRTHDMENG ALELQAGNEIIVSTKQVLGTLGKFSVSYEGLADDVSAGSIILLDDGLIGLEVLESNPEKHEIKTKILNSGTLKNKKGVNV PGVSVNLPGITEKDAKDIVFGIEQGVDFIAASFVRRSTDVLEIRELLEEHNASDIQIIPKIENQEGVDNLDAILEVSDGL MVARGDLGVEIPAEEVPLVQKEMIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGQY PVEAVQTMFNIATRTEESLNYKEILSKRRDQVGMTITDAIGQSVAHTAINLSAAAIVTPTESGHTARMIAKYRPQAPIVA VTVNESVSRKLGLVFGVFPSSGQNANSTDEMLEDAVQKSLDSGIVKRGDLIVITAGSVGESGTTNLMKVHTVGSIIAKGQ GIGRKSAFGPVVVAKNAKEAEQKMTDGAVLVASSTDRDMIASLEKASALITEEGGLTSHAAVVGLSLGIPVIVGLENATS VLTEGQVITVDAARGAVYEGRASVL
Sequences:
>Translated_585_residues MKKTKIVCTIGPASESVEMLTKLMEAGMNVARLNFSHGDFEEHGARIKNIREASKKLGKNVGILLDTKGPEIRTHDMENG ALELQAGNEIIVSTKQVLGTLGKFSVSYEGLADDVSAGSIILLDDGLIGLEVLESNPEKHEIKTKILNSGTLKNKKGVNV PGVSVNLPGITEKDAKDIVFGIEQGVDFIAASFVRRSTDVLEIRELLEEHNASDIQIIPKIENQEGVDNLDAILEVSDGL MVARGDLGVEIPAEEVPLVQKEMIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGQY PVEAVQTMFNIATRTEESLNYKEILSKRRDQVGMTITDAIGQSVAHTAINLSAAAIVTPTESGHTARMIAKYRPQAPIVA VTVNESVSRKLGLVFGVFPSSGQNANSTDEMLEDAVQKSLDSGIVKRGDLIVITAGSVGESGTTNLMKVHTVGSIIAKGQ GIGRKSAFGPVVVAKNAKEAEQKMTDGAVLVASSTDRDMIASLEKASALITEEGGLTSHAAVVGLSLGIPVIVGLENATS VLTEGQVITVDAARGAVYEGRASVL >Mature_585_residues MKKTKIVCTIGPASESVEMLTKLMEAGMNVARLNFSHGDFEEHGARIKNIREASKKLGKNVGILLDTKGPEIRTHDMENG ALELQAGNEIIVSTKQVLGTLGKFSVSYEGLADDVSAGSIILLDDGLIGLEVLESNPEKHEIKTKILNSGTLKNKKGVNV PGVSVNLPGITEKDAKDIVFGIEQGVDFIAASFVRRSTDVLEIRELLEEHNASDIQIIPKIENQEGVDNLDAILEVSDGL MVARGDLGVEIPAEEVPLVQKEMIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGQY PVEAVQTMFNIATRTEESLNYKEILSKRRDQVGMTITDAIGQSVAHTAINLSAAAIVTPTESGHTARMIAKYRPQAPIVA VTVNESVSRKLGLVFGVFPSSGQNANSTDEMLEDAVQKSLDSGIVKRGDLIVITAGSVGESGTTNLMKVHTVGSIIAKGQ GIGRKSAFGPVVVAKNAKEAEQKMTDGAVLVASSTDRDMIASLEKASALITEEGGLTSHAAVVGLSLGIPVIVGLENATS VLTEGQVITVDAARGAVYEGRASVL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI32967597, Length=493, Percent_Identity=44.0162271805274, Blast_Score=399, Evalue=1e-111, Organism=Homo sapiens, GI10835121, Length=493, Percent_Identity=44.0162271805274, Blast_Score=399, Evalue=1e-111, Organism=Homo sapiens, GI33286422, Length=488, Percent_Identity=44.2622950819672, Blast_Score=395, Evalue=1e-110, Organism=Homo sapiens, GI33286420, Length=488, Percent_Identity=44.2622950819672, Blast_Score=395, Evalue=1e-110, Organism=Homo sapiens, GI33286418, Length=488, Percent_Identity=44.2622950819672, Blast_Score=393, Evalue=1e-109, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=47.5862068965517, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=47.5862068965517, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI310128736, Length=238, Percent_Identity=43.2773109243698, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI310128734, Length=238, Percent_Identity=43.2773109243698, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI310128738, Length=217, Percent_Identity=41.4746543778802, Blast_Score=156, Evalue=6e-38, Organism=Escherichia coli, GI1787965, Length=474, Percent_Identity=53.3755274261603, Blast_Score=491, Evalue=1e-140, Organism=Escherichia coli, GI1788160, Length=482, Percent_Identity=40.6639004149378, Blast_Score=304, Evalue=1e-83, Organism=Escherichia coli, GI1787994, Length=107, Percent_Identity=41.1214953271028, Blast_Score=82, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17544584, Length=483, Percent_Identity=46.7908902691511, Blast_Score=400, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17506829, Length=489, Percent_Identity=44.9897750511247, Blast_Score=373, Evalue=1e-103, Organism=Caenorhabditis elegans, GI71984406, Length=489, Percent_Identity=44.9897750511247, Blast_Score=372, Evalue=1e-103, Organism=Caenorhabditis elegans, GI71984413, Length=489, Percent_Identity=44.9897750511247, Blast_Score=372, Evalue=1e-103, Organism=Caenorhabditis elegans, GI17506831, Length=489, Percent_Identity=44.5807770961145, Blast_Score=372, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6319279, Length=485, Percent_Identity=43.0927835051546, Blast_Score=371, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6324923, Length=486, Percent_Identity=41.5637860082305, Blast_Score=354, Evalue=3e-98, Organism=Drosophila melanogaster, GI24648964, Length=486, Percent_Identity=46.0905349794239, Blast_Score=388, Evalue=1e-108, Organism=Drosophila melanogaster, GI28571814, Length=486, Percent_Identity=46.0905349794239, Blast_Score=388, Evalue=1e-108, Organism=Drosophila melanogaster, GI24648966, Length=408, Percent_Identity=45.343137254902, Blast_Score=338, Evalue=8e-93, Organism=Drosophila melanogaster, GI24581235, Length=481, Percent_Identity=34.0956340956341, Blast_Score=268, Evalue=6e-72, Organism=Drosophila melanogaster, GI24646914, Length=266, Percent_Identity=44.3609022556391, Blast_Score=217, Evalue=2e-56,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 61866; Mature: 61866
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTKIVCTIGPASESVEMLTKLMEAGMNVARLNFSHGDFEEHGARIKNIREASKKLGKN CCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC VGILLDTKGPEIRTHDMENGALELQAGNEIIVSTKQVLGTLGKFSVSYEGLADDVSAGSI CEEEEECCCCCEEEEECCCCEEEEECCCEEEEECHHHHHHHHHCEEECCCCCCCCCCCEE ILLDDGLIGLEVLESNPEKHEIKTKILNSGTLKNKKGVNVPGVSVNLPGITEKDAKDIVF EEEECCCEEEHEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHH GIEQGVDFIAASFVRRSTDVLEIRELLEEHNASDIQIIPKIENQEGVDNLDAILEVSDGL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCE MVARGDLGVEIPAEEVPLVQKEMIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVAN EEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH AIFDGTDAIMLSGETAAGQYPVEAVQTMFNIATRTEESLNYKEILSKRRDQVGMTITDAI HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHCCCEEHHHH GQSVAHTAINLSAAAIVTPTESGHTARMIAKYRPQAPIVAVTVNESVSRKLGLVFGVFPS HHHHHHHHHEEEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEECCHHHHCCCEEEEECCC SGQNANSTDEMLEDAVQKSLDSGIVKRGDLIVITAGSVGESGTTNLMKVHTVGSIIAKGQ CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHCCC GIGRKSAFGPVVVAKNAKEAEQKMTDGAVLVASSTDRDMIASLEKASALITEEGGLTSHA CCCCCCCCCCEEEECCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHEEECCCCCCHHH AVVGLSLGIPVIVGLENATSVLTEGQVITVDAARGAVYEGRASVL HHEEEECCCEEEEECCCHHHHHCCCEEEEEECCCCCEECCCCCCC >Mature Secondary Structure MKKTKIVCTIGPASESVEMLTKLMEAGMNVARLNFSHGDFEEHGARIKNIREASKKLGKN CCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC VGILLDTKGPEIRTHDMENGALELQAGNEIIVSTKQVLGTLGKFSVSYEGLADDVSAGSI CEEEEECCCCCEEEEECCCCEEEEECCCEEEEECHHHHHHHHHCEEECCCCCCCCCCCEE ILLDDGLIGLEVLESNPEKHEIKTKILNSGTLKNKKGVNVPGVSVNLPGITEKDAKDIVF EEEECCCEEEHEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHH GIEQGVDFIAASFVRRSTDVLEIRELLEEHNASDIQIIPKIENQEGVDNLDAILEVSDGL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCE MVARGDLGVEIPAEEVPLVQKEMIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVAN EEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH AIFDGTDAIMLSGETAAGQYPVEAVQTMFNIATRTEESLNYKEILSKRRDQVGMTITDAI HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHCCCEEHHHH GQSVAHTAINLSAAAIVTPTESGHTARMIAKYRPQAPIVAVTVNESVSRKLGLVFGVFPS HHHHHHHHHEEEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEECCHHHHCCCEEEEECCC SGQNANSTDEMLEDAVQKSLDSGIVKRGDLIVITAGSVGESGTTNLMKVHTVGSIIAKGQ CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHCCC GIGRKSAFGPVVVAKNAKEAEQKMTDGAVLVASSTDRDMIASLEKASALITEEGGLTSHA CCCCCCCCCCEEEECCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHEEECCCCCCHHH AVVGLSLGIPVIVGLENATSVLTEGQVITVDAARGAVYEGRASVL HHEEEECCCEEEEECCCHHHHHCCCEEEEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 9298659 [H]