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The map label for this gene is ytxB [H]

Identifier: 154687029

GI number: 154687029

Start: 2725203

End: 2725844

Strand: Reverse

Name: ytxB [H]

Synonym: RBAM_026010

Alternate gene names: 154687029

Gene position: 2725844-2725203 (Counterclockwise)

Preceding gene: 154687030

Following gene: 154687028

Centisome position: 69.56

GC content: 51.56

Gene sequence:

>642_bases
ATGAGGAATAAGAAGGCTGTCACTTGGGCTGCGGCTGCGGCGGGAGCGGGCCTTTTGCTGTGGGCAAACCGCAAATATCT
GAATCTGTCGCCTAAGGAGATCCGGCTGTGGGTGTTATCGTTCGGTGTTTTTGCGCCGCTTGTGTTTATCGGAATTTCCA
TCGTCAGGCCTTTTGTGCTGTTTCCCGTATCAATCGTTTCCGTCGCCGGAGGATTGGCGTTCGGCCCGCTTTTCGGCACC
GTGTATACGCTGGCGGGCTCAATGGGCGCTGCCGCCGCGTCTTTTTTTGCGGCGGGGCTGTTTGCCTTTAATGAGAAAAG
CCGTCATGGAAAAATGGAAGCCATTCAAAAGCAGATGAAAACCAATGGCTTCTTTTATATTTTTATCCTGCGCATTCTGC
CTGTTAACTTTGATGTGATCAGCTATGCCGCGGGCCTATCGAAAGTCAGGCCGATGACGTATTTTTTGGCGACCGCAGCG
GGCATCATTCCGGGGACGATCGTCCTGAATGTGCTCGGCGCGAGCTTTATGTCCGGAAATGTGCTGACCGTACTCGGCGT
GATCTGTCTTTACATCGTATTTTTATCGCTTCCCGTTATATTTAAAAAGAAGGTGCGCCATTTGTTCGGCGGTGAAAGCT
AA

Upstream 100 bases:

>100_bases
CTGATGGAGCGGATTTTATATTTGGCTTCGCCCGTCCGTCTTGACGGGGAAAACCGCCGCCGTTCATGATGCCGGCGTCC
AATGGGAAGGATTTGAGGGA

Downstream 100 bases:

>100_bases
CCTTTACGTCTATTTTAAAAACATCCCCCATATACTTGTAACAGATGCCGTAAGGGGGGACAAATATGCTTGAAGTGATC
TTTGAAGATGACCACGATAC

Product: YtxB

Products: NA

Alternate protein names: ORF-213 [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MRNKKAVTWAAAAAGAGLLLWANRKYLNLSPKEIRLWVLSFGVFAPLVFIGISIVRPFVLFPVSIVSVAGGLAFGPLFGT
VYTLAGSMGAAAASFFAAGLFAFNEKSRHGKMEAIQKQMKTNGFFYIFILRILPVNFDVISYAAGLSKVRPMTYFLATAA
GIIPGTIVLNVLGASFMSGNVLTVLGVICLYIVFLSLPVIFKKKVRHLFGGES

Sequences:

>Translated_213_residues
MRNKKAVTWAAAAAGAGLLLWANRKYLNLSPKEIRLWVLSFGVFAPLVFIGISIVRPFVLFPVSIVSVAGGLAFGPLFGT
VYTLAGSMGAAAASFFAAGLFAFNEKSRHGKMEAIQKQMKTNGFFYIFILRILPVNFDVISYAAGLSKVRPMTYFLATAA
GIIPGTIVLNVLGASFMSGNVLTVLGVICLYIVFLSLPVIFKKKVRHLFGGES
>Mature_213_residues
MRNKKAVTWAAAAAGAGLLLWANRKYLNLSPKEIRLWVLSFGVFAPLVFIGISIVRPFVLFPVSIVSVAGGLAFGPLFGT
VYTLAGSMGAAAASFFAAGLFAFNEKSRHGKMEAIQKQMKTNGFFYIFILRILPVNFDVISYAAGLSKVRPMTYFLATAA
GIIPGTIVLNVLGASFMSGNVLTVLGVICLYIVFLSLPVIFKKKVRHLFGGES

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=155, Percent_Identity=27.741935483871, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788049, Length=191, Percent_Identity=27.7486910994764, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22922; Mature: 22922

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKKAVTWAAAAAGAGLLLWANRKYLNLSPKEIRLWVLSFGVFAPLVFIGISIVRPFVL
CCCCCCEEHHHHHCCCEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPVSIVSVAGGLAFGPLFGTVYTLAGSMGAAAASFFAAGLFAFNEKSRHGKMEAIQKQMK
HHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
TNGFFYIFILRILPVNFDVISYAAGLSKVRPMTYFLATAAGIIPGTIVLNVLGASFMSGN
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VLTVLGVICLYIVFLSLPVIFKKKVRHLFGGES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRNKKAVTWAAAAAGAGLLLWANRKYLNLSPKEIRLWVLSFGVFAPLVFIGISIVRPFVL
CCCCCCEEHHHHHCCCEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPVSIVSVAGGLAFGPLFGTVYTLAGSMGAAAASFFAAGLFAFNEKSRHGKMEAIQKQMK
HHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
TNGFFYIFILRILPVNFDVISYAAGLSKVRPMTYFLATAAGIIPGTIVLNVLGASFMSGN
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VLTVLGVICLYIVFLSLPVIFKKKVRHLFGGES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3027671; 8969504; 9387221; 9384377 [H]