Click here to switch to the map view.

The map label for this gene is cstA [H]

Identifier: 154687005

GI number: 154687005

Start: 2699979

End: 2701775

Strand: Reverse

Name: cstA [H]

Synonym: RBAM_025770

Alternate gene names: 154687005

Gene position: 2701775-2699979 (Counterclockwise)

Preceding gene: 154687006

Following gene: 154687000

Centisome position: 68.95

GC content: 51.36

Gene sequence:

>1797_bases
ATGAATGCGATTACAATCGTCATAGCGTCTATATGTATTCTGGCGATCGCCTATCGGCTTTACGGTACCTTTATGATGGT
CAAAGTATTAAAAATCAATGATCAGACACCGACTCCGGCCCATGTGCTTGAGGATGGGAAAGATTATGTGCCGACGAATA
AGTGGGTGTCATTCGGCCACCACTTCGCGGCAATCGCCGCTGCCGGCCCGCTTGTCGGACCGATTCTGGCAGCTCAGTTC
GGCTATCTGCCCGGGCTTTTATGGCTGTTAATCGGGGCGGTGATCGGAGGAGCCGTGCACGATATTGTCGTATTGTTTGC
ATCAATGCGGAAAAACGGGAAAACACTTTCTGAAGTCGCCAAAGAAGAGCTCGGCCCGGTGGCGGGTTTTTGCACGGGTC
TCTCGATGCTGTTTATCATTACGATCACGATGGCGGGGCTGTCCATGGTTGTGCTGCACGCGCTTGAGAAAAACCCGTGG
GGAACGTTTGCGGTGGGGATTACGATTCCGATCGCGATGGGGGTCGGCCTCTACTATAAAAAAACGGGCAATCTCAAACT
CGCATCAACTGTCGGGTTTCTTTTGTTAATGGCCGGTGTTGTCATCGGGCCGCGGCTGCAGACAACGGCTCTCGGGGACA
TGCTGACACTGGATGCGAAAACGCTTGCAGTGGCGCTTCCTGTCTATGCGTTTTTCGCCGCGGCGCTTCCGGTTTGGCTT
TTGCTGGCTCCGCGTGACTATTTAAGCAGTTTTATGAAAATCGGGGTTTTTGCCGCTTTGATCGCAGGCGTCTTTTTCGT
CAATCCCGCCATTAAATTTCCGGCCGTAACGGAGTTTATTCACGGCGGAGGGCCGGTGATCGCGGGTCCTGTCTGGCCGT
TTATTTCAATAACGATTGCCTGCGGCGCCATTTCGGGCTTTCATGCATTTGTCGGTTCCGGCACAACGCCGAAAATGCTG
GATAAATGGAGTGATATAAAGCCGGTTGCTTTCGGAGCGATGCTTGTGGAATGTCTCGTCGGAATTATGGCGCTCATTGC
AGCTGCCGCTCTTGAGCCCGCCGACTATTTTGCTATTAACAGCACGCCTGAAATATTCCGCACCCTCGGGATGAATGTCG
TCCATCTGCCTGAATTGAGTAAAGAAATCGGGCTCAGTCTGGAAGGAAGAACGGGCGGCGCTGTTACGCTTGCCGTCGGA
ATGACGTATATCTTTACGGAGATTCCGTTTTTCAGTCATTTGGCTTCATACTTTTTTCAATTCGTCATTATGTTTGAAGC
GGTGTTTATTTTAACGGCGATTGATGCGGGAACCCGTGTCGCCCGGTACTTGATTCAAGAGTTTTTCGGAGAGGTCTATA
AGCCGCTGAAAAAAACAGACTGGCTGCCGGGCTCGATTTTCTCAAGCGCGCTCGCCTGCCTGCTGTGGGGCTATCTTCTG
TATTCGGGCGACATCAGCTCCATTTGGGCGCTGTTCGGCGTATCCAATCAGCTTATGGCGTCTGTCGGCTTAATTATCGG
TGCGACCGTCGTATTAAAAATAGCGGATAAGCGGCGCTATATGCTGACATGCCTGATTCCCCTCGCTTATTTGTACGTGA
CCGTCAACTATGCGGGTTATTGGATGGTGCGGTATGTGTATTTGAACCCCGAAGCGGCGGGATACAACGTGCTGAATGGC
GTTTTATCCATTATCATGCTCATTCTCGGGCTTGTGATTATCATTGCGGCTGTGAAAAAATGGGCGAATGTATGGCGTGA
TCCGAGTGCCAGACTGGAAGCTTCAATACCCGGATAA

Upstream 100 bases:

>100_bases
AGCCGGGCTGCGCCGCCGGCTTTTTTTTACGCAAAAATCATCTCCTGTTATCTGATAATTGTGATAATATTTAGAAAAAG
AGAAAAGGGGCTGGGATTAA

Downstream 100 bases:

>100_bases
ATCCGCGGCCGTCCGAACATTGCAGCATCATAAAAAAAGCAGAGAGCCGATCGGTCTCTCTGCTTTCATCTTATGACAAA
TCCGCCGCTTCCAAAAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MNAITIVIASICILAIAYRLYGTFMMVKVLKINDQTPTPAHVLEDGKDYVPTNKWVSFGHHFAAIAAAGPLVGPILAAQF
GYLPGLLWLLIGAVIGGAVHDIVVLFASMRKNGKTLSEVAKEELGPVAGFCTGLSMLFIITITMAGLSMVVLHALEKNPW
GTFAVGITIPIAMGVGLYYKKTGNLKLASTVGFLLLMAGVVIGPRLQTTALGDMLTLDAKTLAVALPVYAFFAAALPVWL
LLAPRDYLSSFMKIGVFAALIAGVFFVNPAIKFPAVTEFIHGGGPVIAGPVWPFISITIACGAISGFHAFVGSGTTPKML
DKWSDIKPVAFGAMLVECLVGIMALIAAAALEPADYFAINSTPEIFRTLGMNVVHLPELSKEIGLSLEGRTGGAVTLAVG
MTYIFTEIPFFSHLASYFFQFVIMFEAVFILTAIDAGTRVARYLIQEFFGEVYKPLKKTDWLPGSIFSSALACLLWGYLL
YSGDISSIWALFGVSNQLMASVGLIIGATVVLKIADKRRYMLTCLIPLAYLYVTVNYAGYWMVRYVYLNPEAAGYNVLNG
VLSIIMLILGLVIIIAAVKKWANVWRDPSARLEASIPG

Sequences:

>Translated_598_residues
MNAITIVIASICILAIAYRLYGTFMMVKVLKINDQTPTPAHVLEDGKDYVPTNKWVSFGHHFAAIAAAGPLVGPILAAQF
GYLPGLLWLLIGAVIGGAVHDIVVLFASMRKNGKTLSEVAKEELGPVAGFCTGLSMLFIITITMAGLSMVVLHALEKNPW
GTFAVGITIPIAMGVGLYYKKTGNLKLASTVGFLLLMAGVVIGPRLQTTALGDMLTLDAKTLAVALPVYAFFAAALPVWL
LLAPRDYLSSFMKIGVFAALIAGVFFVNPAIKFPAVTEFIHGGGPVIAGPVWPFISITIACGAISGFHAFVGSGTTPKML
DKWSDIKPVAFGAMLVECLVGIMALIAAAALEPADYFAINSTPEIFRTLGMNVVHLPELSKEIGLSLEGRTGGAVTLAVG
MTYIFTEIPFFSHLASYFFQFVIMFEAVFILTAIDAGTRVARYLIQEFFGEVYKPLKKTDWLPGSIFSSALACLLWGYLL
YSGDISSIWALFGVSNQLMASVGLIIGATVVLKIADKRRYMLTCLIPLAYLYVTVNYAGYWMVRYVYLNPEAAGYNVLNG
VLSIIMLILGLVIIIAAVKKWANVWRDPSARLEASIPG
>Mature_598_residues
MNAITIVIASICILAIAYRLYGTFMMVKVLKINDQTPTPAHVLEDGKDYVPTNKWVSFGHHFAAIAAAGPLVGPILAAQF
GYLPGLLWLLIGAVIGGAVHDIVVLFASMRKNGKTLSEVAKEELGPVAGFCTGLSMLFIITITMAGLSMVVLHALEKNPW
GTFAVGITIPIAMGVGLYYKKTGNLKLASTVGFLLLMAGVVIGPRLQTTALGDMLTLDAKTLAVALPVYAFFAAALPVWL
LLAPRDYLSSFMKIGVFAALIAGVFFVNPAIKFPAVTEFIHGGGPVIAGPVWPFISITIACGAISGFHAFVGSGTTPKML
DKWSDIKPVAFGAMLVECLVGIMALIAAAALEPADYFAINSTPEIFRTLGMNVVHLPELSKEIGLSLEGRTGGAVTLAVG
MTYIFTEIPFFSHLASYFFQFVIMFEAVFILTAIDAGTRVARYLIQEFFGEVYKPLKKTDWLPGSIFSSALACLLWGYLL
YSGDISSIWALFGVSNQLMASVGLIIGATVVLKIADKRRYMLTCLIPLAYLYVTVNYAGYWMVRYVYLNPEAAGYNVLNG
VLSIIMLILGLVIIIAAVKKWANVWRDPSARLEASIPG

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=568, Percent_Identity=43.6619718309859, Blast_Score=453, Evalue=1e-128,
Organism=Escherichia coli, GI87082431, Length=676, Percent_Identity=39.6449704142012, Blast_Score=451, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 64286; Mature: 64286

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAITIVIASICILAIAYRLYGTFMMVKVLKINDQTPTPAHVLEDGKDYVPTNKWVSFGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCCCCCCCHHHHHHH
HFAAIAAAGPLVGPILAAQFGYLPGLLWLLIGAVIGGAVHDIVVLFASMRKNGKTLSEVA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KEELGPVAGFCTGLSMLFIITITMAGLSMVVLHALEKNPWGTFAVGITIPIAMGVGLYYK
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCEEEE
KTGNLKLASTVGFLLLMAGVVIGPRLQTTALGDMLTLDAKTLAVALPVYAFFAAALPVWL
ECCCEEHHHHHHHHHHHHHHHHCCCCHHHHHCHHHEECHHHHHHHHHHHHHHHHHHHHHH
LLAPRDYLSSFMKIGVFAALIAGVFFVNPAIKFPAVTEFIHGGGPVIAGPVWPFISITIA
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHH
CGAISGFHAFVGSGTTPKMLDKWSDIKPVAFGAMLVECLVGIMALIAAAALEPADYFAIN
HHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
STPEIFRTLGMNVVHLPELSKEIGLSLEGRTGGAVTLAVGMTYIFTEIPFFSHLASYFFQ
CCHHHHHHHCCCEEECCHHHHHHCCEEECCCCCEEEHHHHHHHHHHHCHHHHHHHHHHHH
FVIMFEAVFILTAIDAGTRVARYLIQEFFGEVYKPLKKTDWLPGSIFSSALACLLWGYLL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YSGDISSIWALFGVSNQLMASVGLIIGATVVLKIADKRRYMLTCLIPLAYLYVTVNYAGY
HCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCE
WMVRYVYLNPEAAGYNVLNGVLSIIMLILGLVIIIAAVKKWANVWRDPSARLEASIPG
EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC
>Mature Secondary Structure
MNAITIVIASICILAIAYRLYGTFMMVKVLKINDQTPTPAHVLEDGKDYVPTNKWVSFGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCCCCCCCHHHHHHH
HFAAIAAAGPLVGPILAAQFGYLPGLLWLLIGAVIGGAVHDIVVLFASMRKNGKTLSEVA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KEELGPVAGFCTGLSMLFIITITMAGLSMVVLHALEKNPWGTFAVGITIPIAMGVGLYYK
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCEEEE
KTGNLKLASTVGFLLLMAGVVIGPRLQTTALGDMLTLDAKTLAVALPVYAFFAAALPVWL
ECCCEEHHHHHHHHHHHHHHHHCCCCHHHHHCHHHEECHHHHHHHHHHHHHHHHHHHHHH
LLAPRDYLSSFMKIGVFAALIAGVFFVNPAIKFPAVTEFIHGGGPVIAGPVWPFISITIA
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHH
CGAISGFHAFVGSGTTPKMLDKWSDIKPVAFGAMLVECLVGIMALIAAAALEPADYFAIN
HHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
STPEIFRTLGMNVVHLPELSKEIGLSLEGRTGGAVTLAVGMTYIFTEIPFFSHLASYFFQ
CCHHHHHHHCCCEEECCHHHHHHCCEEECCCCCEEEHHHHHHHHHHHCHHHHHHHHHHHH
FVIMFEAVFILTAIDAGTRVARYLIQEFFGEVYKPLKKTDWLPGSIFSSALACLLWGYLL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YSGDISSIWALFGVSNQLMASVGLIIGATVVLKIADKRRYMLTCLIPLAYLYVTVNYAGY
HCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCE
WMVRYVYLNPEAAGYNVLNGVLSIIMLILGLVIIIAAVKKWANVWRDPSARLEASIPG
EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]