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The map label for this gene is etfB [H]

Identifier: 154686987

GI number: 154686987

Start: 2679631

End: 2680404

Strand: Reverse

Name: etfB [H]

Synonym: RBAM_025590

Alternate gene names: 154686987

Gene position: 2680404-2679631 (Counterclockwise)

Preceding gene: 154686988

Following gene: 154686986

Centisome position: 68.4

GC content: 48.45

Gene sequence:

>774_bases
ATGAATCTATTTGTACTGATGAAACGGACGTTTGACACAGAAGAGAAAATCGTCATTGAAGCAGGAAAGATTCAGGAGGA
CGGGGCCGAATTTATCATTAATCCGTATGATGAATACGCCATTGAAGAAGCCATTCAGCTGAAGGAAGAGCACGGCGGAA
CCGTTACCGCCGTAACCGTCGGCGGAGAAGATGCGGAGAAAGAACTGAGAACCGCCCTTGCGATGGGCTGTGACCAGGCG
GTGTTAATCAATATTGAAGATGATCTGAGCGATCCTGACCAATACTCCATTTCAACTATCTTATATCATTATTTCAAGGA
CCGGGAATATGATCTGATTCTCGGCGGAAATGTCGCGATTGACGGCGGTTCAGGCCAAGTGGCTCCAAGGCTTGCCGAAC
TGCTGAACATTCCTTGCGTCACAACGATCACAAAACTGACAATCAGCGGTGATGAAGCTGTGGCAGAGAAAGACAATGAA
GGGGATACCGAAATCATTAAAACCTCACTTCCTTTAGTCATCACGGCACAGCAAGGCTTAAACGAGCCGCGCTATCCGTC
GCTTCCGGGCATTATGAAGGCGAAGAAAAAACCGCTGGAAGAACTTGAGCTCGATGACCTCGACATTGATGAAGATGATG
CCGCACCGAAGCTCAAAACGATCGAACGTTTTCTGCCGCCGCAAAAAGAAGCGGGCAGACTGATCGAAGGAGAAGCCGCT
GAGCAGGCGAAAGAGCTTGTGTCACTGCTGAGAAAAGAAGCCAAAGTCGTATAA

Upstream 100 bases:

>100_bases
GGGGAAGCATTTGCATCAGATGACGCAAAAGAAGGCATTCAGGCATTTCTCGAAAAAAGAAAGCCTCAATTCGGTGGGCG
AAGATAAAGGGGATAAGATT

Downstream 100 bases:

>100_bases
ACCGATATTAAAGAAACTGGGGGATGTCAGAATGGGAAAAAAAGTGATCGTACTCGGAGAAATTCGTGACGGCGCCTTAC
GGAACGTCACCTTTGAAGCC

Product: EtfB

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNLFVLMKRTFDTEEKIVIEAGKIQEDGAEFIINPYDEYAIEEAIQLKEEHGGTVTAVTVGGEDAEKELRTALAMGCDQA
VLINIEDDLSDPDQYSISTILYHYFKDREYDLILGGNVAIDGGSGQVAPRLAELLNIPCVTTITKLTISGDEAVAEKDNE
GDTEIIKTSLPLVITAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDIDEDDAAPKLKTIERFLPPQKEAGRLIEGEAA
EQAKELVSLLRKEAKVV

Sequences:

>Translated_257_residues
MNLFVLMKRTFDTEEKIVIEAGKIQEDGAEFIINPYDEYAIEEAIQLKEEHGGTVTAVTVGGEDAEKELRTALAMGCDQA
VLINIEDDLSDPDQYSISTILYHYFKDREYDLILGGNVAIDGGSGQVAPRLAELLNIPCVTTITKLTISGDEAVAEKDNE
GDTEIIKTSLPLVITAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDIDEDDAAPKLKTIERFLPPQKEAGRLIEGEAA
EQAKELVSLLRKEAKVV
>Mature_257_residues
MNLFVLMKRTFDTEEKIVIEAGKIQEDGAEFIINPYDEYAIEEAIQLKEEHGGTVTAVTVGGEDAEKELRTALAMGCDQA
VLINIEDDLSDPDQYSISTILYHYFKDREYDLILGGNVAIDGGSGQVAPRLAELLNIPCVTTITKLTISGDEAVAEKDNE
GDTEIIKTSLPLVITAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDIDEDDAAPKLKTIERFLPPQKEAGRLIEGEAA
EQAKELVSLLRKEAKVV

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=242, Percent_Identity=35.1239669421488, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI62420877, Length=214, Percent_Identity=36.9158878504673, Blast_Score=119, Evalue=2e-27,
Organism=Escherichia coli, GI87081682, Length=258, Percent_Identity=29.4573643410853, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI2367123, Length=255, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87082158, Length=196, Percent_Identity=27.0408163265306, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=249, Percent_Identity=35.3413654618474, Blast_Score=140, Evalue=7e-34,
Organism=Saccharomyces cerevisiae, GI6321646, Length=245, Percent_Identity=35.5102040816327, Blast_Score=115, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24651147, Length=237, Percent_Identity=36.2869198312236, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24651145, Length=237, Percent_Identity=36.2869198312236, Blast_Score=109, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28286; Mature: 28286

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFVLMKRTFDTEEKIVIEAGKIQEDGAEFIINPYDEYAIEEAIQLKEEHGGTVTAVTV
CCEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEEE
GGEDAEKELRTALAMGCDQAVLINIEDDLSDPDQYSISTILYHYFKDREYDLILGGNVAI
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEE
DGGSGQVAPRLAELLNIPCVTTITKLTISGDEAVAEKDNEGDTEIIKTSLPLVITAQQGL
ECCCCCHHHHHHHHHCCCHHHEEEEEEECCCHHHHCCCCCCCHHEEEECCCEEEECCCCC
NEPRYPSLPGIMKAKKKPLEELELDDLDIDEDDAAPKLKTIERFLPPQKEAGRLIEGEAA
CCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCEECCHHH
EQAKELVSLLRKEAKVV
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLFVLMKRTFDTEEKIVIEAGKIQEDGAEFIINPYDEYAIEEAIQLKEEHGGTVTAVTV
CCEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEEE
GGEDAEKELRTALAMGCDQAVLINIEDDLSDPDQYSISTILYHYFKDREYDLILGGNVAI
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEE
DGGSGQVAPRLAELLNIPCVTTITKLTISGDEAVAEKDNEGDTEIIKTSLPLVITAQQGL
ECCCCCHHHHHHHHHCCCHHHEEEEEEECCCHHHHCCCCCCCHHEEEECCCEEEECCCCC
NEPRYPSLPGIMKAKKKPLEELELDDLDIDEDDAAPKLKTIERFLPPQKEAGRLIEGEAA
CCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCEECCHHH
EQAKELVSLLRKEAKVV
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]