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The map label for this gene is gerM [H]

Identifier: 154686973

GI number: 154686973

Start: 2665500

End: 2666585

Strand: Reverse

Name: gerM [H]

Synonym: RBAM_025450

Alternate gene names: 154686973

Gene position: 2666585-2665500 (Counterclockwise)

Preceding gene: 154686974

Following gene: 154686972

Centisome position: 68.05

GC content: 46.41

Gene sequence:

>1086_bases
ATGCTGAAAAAAGGACCTGCAGTCATTGCTGCAACATGTCTTACTTCGGCTTTTGTGTTATCTGGATGCGGTTTGTTTCA
ATCCGATAAAACAGCCGGGGAAATTGACCCGCCTCAAGACATTTCATATGTAAAGGATGAAGCGGGAATTCAGGCAAAAC
CAAAGCAGTCAGAGAAAAACGGCACTTCTAAAGCCGACCAGCCGGCCAATACAGTCATGCGAGAGCTGTATCTGATTGAT
AAAAACGGCTATGTCGCAGCACAGACACTGCCTCTTCCGAACAGTGAGGGAACCGCAAAGCAGGCCCTTGAGTATTTGGT
TCAGGGAGGGCCTGTGTCAGAAATCCTGCCGAACGGCTTCAGAGCGGTGCTCCCTGCGGATACGACGGTAAATGTCGATA
TTAAAAAAGACGGCACTGCCGTCGCTGATTTTTCGAAGGAATTTAAAAACTATAAAAAAGAAGACGAACAAAAAATCCTG
CAATCGATTACATGGACGCTTACCCAATTCAGCTCAATAGATAAAGTCAAAATCAGAATCAACGGGCACGAACTGAAAGA
AATGCCTGTGGGCGGCACTCCGATTACGGGCGACTTAAGCAGAAAAGACGGGATTAATATTGAAACGGCCGGAGTGAATG
ATCTGACAGACACCCATCCGCTGACTGTCTATTATCTGGCGGAAACAGAGACGAGCGAATACTACGTGCCTGTCACAAAG
CGGATTGACAATTCGGAAACAGATGACATCACCGCTGCCGTTGAACAGCTCGCCGACGGACCGGGCAAAGCAAGCGGGCT
TTTGACGGACTTTAATAACGATGTTAAGCTTCTCAGCAAGCCGAAAGTAAAAGACGGCCAGGTTACACTGGACTTTAACA
GCTCCATTTACGGAAGCGCCGACGAAAAAACAAAAATGGTATCATCGGGCGTACTGGACAGCATCGTTCTCACGTTAACC
GAACAGCCGTCGATTAAAAGTGTTTCTATAAAAGTAAACGGAAAATCAGAACTGGTGAATGAAAAAGGAGAATCCCTTTC
AAAACCTGTTTCGAGGCCGTCACAAGTGAATACGGGTAGTTTTTAA

Upstream 100 bases:

>100_bases
AAAACCCGCTGTTTACGGCGGGTTTTTTTGCGCTTCCCGGTCTATTTCCCGGACAGGGCTCGTATACATCATAGTACAAA
CAGCCTTAGGAGGGAAAAGT

Downstream 100 bases:

>100_bases
TTTGCGATTTTTGATATACTAGTAAAAAAGAGGTTAGCGTTCCGGCTGCCTCTTTCTTTATTCACAATCCGGAACAAAAG
GTTTATGTACATATAATCGG

Product: GerM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MLKKGPAVIAATCLTSAFVLSGCGLFQSDKTAGEIDPPQDISYVKDEAGIQAKPKQSEKNGTSKADQPANTVMRELYLID
KNGYVAAQTLPLPNSEGTAKQALEYLVQGGPVSEILPNGFRAVLPADTTVNVDIKKDGTAVADFSKEFKNYKKEDEQKIL
QSITWTLTQFSSIDKVKIRINGHELKEMPVGGTPITGDLSRKDGINIETAGVNDLTDTHPLTVYYLAETETSEYYVPVTK
RIDNSETDDITAAVEQLADGPGKASGLLTDFNNDVKLLSKPKVKDGQVTLDFNSSIYGSADEKTKMVSSGVLDSIVLTLT
EQPSIKSVSIKVNGKSELVNEKGESLSKPVSRPSQVNTGSF

Sequences:

>Translated_361_residues
MLKKGPAVIAATCLTSAFVLSGCGLFQSDKTAGEIDPPQDISYVKDEAGIQAKPKQSEKNGTSKADQPANTVMRELYLID
KNGYVAAQTLPLPNSEGTAKQALEYLVQGGPVSEILPNGFRAVLPADTTVNVDIKKDGTAVADFSKEFKNYKKEDEQKIL
QSITWTLTQFSSIDKVKIRINGHELKEMPVGGTPITGDLSRKDGINIETAGVNDLTDTHPLTVYYLAETETSEYYVPVTK
RIDNSETDDITAAVEQLADGPGKASGLLTDFNNDVKLLSKPKVKDGQVTLDFNSSIYGSADEKTKMVSSGVLDSIVLTLT
EQPSIKSVSIKVNGKSELVNEKGESLSKPVSRPSQVNTGSF
>Mature_361_residues
MLKKGPAVIAATCLTSAFVLSGCGLFQSDKTAGEIDPPQDISYVKDEAGIQAKPKQSEKNGTSKADQPANTVMRELYLID
KNGYVAAQTLPLPNSEGTAKQALEYLVQGGPVSEILPNGFRAVLPADTTVNVDIKKDGTAVADFSKEFKNYKKEDEQKIL
QSITWTLTQFSSIDKVKIRINGHELKEMPVGGTPITGDLSRKDGINIETAGVNDLTDTHPLTVYYLAETETSEYYVPVTK
RIDNSETDDITAAVEQLADGPGKASGLLTDFNNDVKLLSKPKVKDGQVTLDFNSSIYGSADEKTKMVSSGVLDSIVLTLT
EQPSIKSVSIKVNGKSELVNEKGESLSKPVSRPSQVNTGSF

Specific function: Unknown. Affects both sporulation and germination [H]

COG id: COG5401

COG function: function code R; Spore germination protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019606 [H]

Pfam domain/function: PF10646 Germane [H]

EC number: NA

Molecular weight: Translated: 38842; Mature: 38842

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKGPAVIAATCLTSAFVLSGCGLFQSDKTAGEIDPPQDISYVKDEAGIQAKPKQSEKN
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
GTSKADQPANTVMRELYLIDKNGYVAAQTLPLPNSEGTAKQALEYLVQGGPVSEILPNGF
CCCCCCCHHHHHHHHEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHCCCCC
RAVLPADTTVNVDIKKDGTAVADFSKEFKNYKKEDEQKILQSITWTLTQFSSIDKVKIRI
EEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
NGHELKEMPVGGTPITGDLSRKDGINIETAGVNDLTDTHPLTVYYLAETETSEYYVPVTK
CCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEHH
RIDNSETDDITAAVEQLADGPGKASGLLTDFNNDVKLLSKPKVKDGQVTLDFNSSIYGSA
CCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCC
DEKTKMVSSGVLDSIVLTLTEQPSIKSVSIKVNGKSELVNEKGESLSKPVSRPSQVNTGS
CHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCC
F
C
>Mature Secondary Structure
MLKKGPAVIAATCLTSAFVLSGCGLFQSDKTAGEIDPPQDISYVKDEAGIQAKPKQSEKN
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
GTSKADQPANTVMRELYLIDKNGYVAAQTLPLPNSEGTAKQALEYLVQGGPVSEILPNGF
CCCCCCCHHHHHHHHEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHCCCCC
RAVLPADTTVNVDIKKDGTAVADFSKEFKNYKKEDEQKILQSITWTLTQFSSIDKVKIRI
EEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
NGHELKEMPVGGTPITGDLSRKDGINIETAGVNDLTDTHPLTVYYLAETETSEYYVPVTK
CCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEHH
RIDNSETDDITAAVEQLADGPGKASGLLTDFNNDVKLLSKPKVKDGQVTLDFNSSIYGSA
CCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCC
DEKTKMVSSGVLDSIVLTLTEQPSIKSVSIKVNGKSELVNEKGESLSKPVSRPSQVNTGS
CHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377; 2846748 [H]