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The map label for this gene is safA [H]

Identifier: 154686919

GI number: 154686919

Start: 2609121

End: 2610341

Strand: Reverse

Name: safA [H]

Synonym: RBAM_024890

Alternate gene names: 154686919

Gene position: 2610341-2609121 (Counterclockwise)

Preceding gene: 154686920

Following gene: 154686918

Centisome position: 66.61

GC content: 48.65

Gene sequence:

>1221_bases
TTGAAAATTCATATCGTTCAAAAAGGCGATTCGCTCTGGAAAATAGCTGAAAAATACGGAGTTGATCTTGAAGAGTTAAA
AAAACTGAATCATCAGCTTAGCAATCCAGACTTAATTATGCCTGGAATGAAGATAAAGGTGCCTTCAGAAGCCGTTCCGG
TCAGAAAAGAACCTAAGGCCGGCTTCGGAACGTCTGCGCATAAGCATGAGCATCCATATGCCAAAGAAAAACCGAAATCA
GTTGTGGACATTGAAGACACCATACCGGAAGAACCAAAGCCGTCAATTCCGTATGTGCCGCCAATCCCTGAAAAGCATGA
AAATGTGCTGCCGGAAGCTGATATGAACCAATATTACCCGTCCAATCAGCTGTTTCAGCCGTGGTCGCCTCCTAAGCCGG
AGGAACCGGTGACACATTTTGTCGAGCCGAAAGAAAAAGAGCATGACAATAACATTCCACAACAGGAGGAAATGATCAAC
ATGGAAAACGCGAATTACCCGAATATGCCAAAGGCGCCTGAAGCCGGAAAGATGGAAGAAGAAAACGCCGCTTATCATCT
GCCGAACATGCCAAACATTCCGAATGTCCCGTTTCCGAATATGCCGGCCGTTGAACCGTCTTTTATGCATTACCCGATGC
CGTGCATGCCTTGTCCTTGTCCGGTTCCGGTGACACCGATGCTGCCGGGTTCGGGACTATGCCATCCATGCTTCCCGGTA
GGCGGAGGTTTCGGCGGTTTTGGAGGAGGTTTTGGAGGCTTTCCGGTCATGCCGATGCCGTTACCGTACGGATTCCATCA
TCCGGGATTTGGGCCGCAAGCGGGTTACGGTGAATATGAAAACCAGGCCCATGAAAATGCAGAGCATTATGATGGTTCTG
CATCTGGTTTCGGCGGTGCTCCGTACGGTCAAATGCCGTATTACGGCGGATATTCGTCACATTACGCAAACGCGCCTCAT
CATGATGGAAAATATAAGGATGATGATTGCGGCTGCCATGATTCACATCACCACCACCATCATCACCACGGTTCACATCA
TCATGGTTCACATCATCATGGTTCACATCATCATCACGCAAATATGCCTGTGCAGCCGTATCCGAATATGGGCGCAAGTG
CCGGATATTTTATGCCTTATGGCGGAGCAAATCCCAATGCCGCGCCGAATCAGCCGAGTCCAAATCAAGTATTCGGACGG
CCGGAAGAAGAAGAAGATTAA

Upstream 100 bases:

>100_bases
ATTTTTTATCATCATGCCCAGTCCATCGGCATATAGTGTGAAGAAACGTATTGTAATGACAAATGTACCGTTCACGTTTT
GTGCATAGGAGGGGAAAACG

Downstream 100 bases:

>100_bases
TGTTTCGGGACGATGTATGTCGTTCCTTTTTTTATGTCCAACTGAGGAATGGACATAACTGACAAGCTTAAACCCGCCGC
CCGCCGCACATCCTAAACAT

Product: SafA

Products: NA

Alternate protein names: Morphogenetic protein safA [H]

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKIHIVQKGDSLWKIAEKYGVDLEELKKLNHQLSNPDLIMPGMKIKVPSEAVPVRKEPKAGFGTSAHKHEHPYAKEKPKS
VVDIEDTIPEEPKPSIPYVPPIPEKHENVLPEADMNQYYPSNQLFQPWSPPKPEEPVTHFVEPKEKEHDNNIPQQEEMIN
MENANYPNMPKAPEAGKMEEENAAYHLPNMPNIPNVPFPNMPAVEPSFMHYPMPCMPCPCPVPVTPMLPGSGLCHPCFPV
GGGFGGFGGGFGGFPVMPMPLPYGFHHPGFGPQAGYGEYENQAHENAEHYDGSASGFGGAPYGQMPYYGGYSSHYANAPH
HDGKYKDDDCGCHDSHHHHHHHHGSHHHGSHHHGSHHHHANMPVQPYPNMGASAGYFMPYGGANPNAAPNQPSPNQVFGR
PEEEED

Sequences:

>Translated_406_residues
MKIHIVQKGDSLWKIAEKYGVDLEELKKLNHQLSNPDLIMPGMKIKVPSEAVPVRKEPKAGFGTSAHKHEHPYAKEKPKS
VVDIEDTIPEEPKPSIPYVPPIPEKHENVLPEADMNQYYPSNQLFQPWSPPKPEEPVTHFVEPKEKEHDNNIPQQEEMIN
MENANYPNMPKAPEAGKMEEENAAYHLPNMPNIPNVPFPNMPAVEPSFMHYPMPCMPCPCPVPVTPMLPGSGLCHPCFPV
GGGFGGFGGGFGGFPVMPMPLPYGFHHPGFGPQAGYGEYENQAHENAEHYDGSASGFGGAPYGQMPYYGGYSSHYANAPH
HDGKYKDDDCGCHDSHHHHHHHHGSHHHGSHHHGSHHHHANMPVQPYPNMGASAGYFMPYGGANPNAAPNQPSPNQVFGR
PEEEED
>Mature_406_residues
MKIHIVQKGDSLWKIAEKYGVDLEELKKLNHQLSNPDLIMPGMKIKVPSEAVPVRKEPKAGFGTSAHKHEHPYAKEKPKS
VVDIEDTIPEEPKPSIPYVPPIPEKHENVLPEADMNQYYPSNQLFQPWSPPKPEEPVTHFVEPKEKEHDNNIPQQEEMIN
MENANYPNMPKAPEAGKMEEENAAYHLPNMPNIPNVPFPNMPAVEPSFMHYPMPCMPCPCPVPVTPMLPGSGLCHPCFPV
GGGFGGFGGGFGGFPVMPMPLPYGFHHPGFGPQAGYGEYENQAHENAEHYDGSASGFGGAPYGQMPYYGGYSSHYANAPH
HDGKYKDDDCGCHDSHHHHHHHHGSHHHGSHHHGSHHHHANMPVQPYPNMGASAGYFMPYGGANPNAAPNQPSPNQVFGR
PEEEED

Specific function: Probably involved in the assembly of some coat protein components implicated in both lysozyme resistance and germination. Could be required for the assembly of CotG. Associates with SpoIVD during the early stage of coat assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore cortex. Note=At the coat- cortex interface [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR014248 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 44954; Mature: 44954

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHIVQKGDSLWKIAEKYGVDLEELKKLNHQLSNPDLIMPGMKIKVPSEAVPVRKEPKA
CEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCCCC
GFGTSAHKHEHPYAKEKPKSVVDIEDTIPEEPKPSIPYVPPIPEKHENVLPEADMNQYYP
CCCCCCCCCCCCCHHHCCCCEEEHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCC
SNQLFQPWSPPKPEEPVTHFVEPKEKEHDNNIPQQEEMINMENANYPNMPKAPEAGKMEE
CCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
ENAAYHLPNMPNIPNVPFPNMPAVEPSFMHYPMPCMPCPCPVPVTPMLPGSGLCHPCFPV
CCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGGFGGFGGGFGGFPVMPMPLPYGFHHPGFGPQAGYGEYENQAHENAEHYDGSASGFGGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PYGQMPYYGGYSSHYANAPHHDGKYKDDDCGCHDSHHHHHHHHGSHHHGSHHHGSHHHHA
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NMPVQPYPNMGASAGYFMPYGGANPNAAPNQPSPNQVFGRPEEEED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIHIVQKGDSLWKIAEKYGVDLEELKKLNHQLSNPDLIMPGMKIKVPSEAVPVRKEPKA
CEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCCCC
GFGTSAHKHEHPYAKEKPKSVVDIEDTIPEEPKPSIPYVPPIPEKHENVLPEADMNQYYP
CCCCCCCCCCCCCHHHCCCCEEEHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCC
SNQLFQPWSPPKPEEPVTHFVEPKEKEHDNNIPQQEEMINMENANYPNMPKAPEAGKMEE
CCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
ENAAYHLPNMPNIPNVPFPNMPAVEPSFMHYPMPCMPCPCPVPVTPMLPGSGLCHPCFPV
CCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGGFGGFGGGFGGFPVMPMPLPYGFHHPGFGPQAGYGEYENQAHENAEHYDGSASGFGGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PYGQMPYYGGYSSHYANAPHHDGKYKDDDCGCHDSHHHHHHHHGSHHHGSHHHGSHHHHA
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NMPVQPYPNMGASAGYFMPYGGANPNAAPNQPSPNQVFGRPEEEED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9770294; 9384377 [H]