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The map label for this gene is yrrD [H]

Identifier: 154686888

GI number: 154686888

Start: 2576365

End: 2576883

Strand: Reverse

Name: yrrD [H]

Synonym: RBAM_024580

Alternate gene names: 154686888

Gene position: 2576883-2576365 (Counterclockwise)

Preceding gene: 154686889

Following gene: 154686887

Centisome position: 65.76

GC content: 49.13

Gene sequence:

>519_bases
ATGCTGCCCGGCTTCTTGGCAAAACCTATACGTGTTCAACAAAAGGTGGTTGATCACACTTTGAGAACATGCCATGCAGC
TGAAGGACGAACAGTATATGACGAAAACACCGGGCGCAGTCTCGGGATGATATCGGATGTATGTTTCTCTCTTGACGGCC
GGTTTCTCGGTTTCGTGCTGGAGCAGAAACGCCTGTTTCACAACCGCCATCTTTTTTTAGAGGCAAGTGATATAAAAGAG
ATGGATCAAGAAGCCGTAGCTGCCGGTCATGCTCATTTGCAGCCTTTGCCGAAGAGCTGTTTCACCTTTGAACAGATTAA
GATGCAGCCGGTGAAATCGCCTGATGGTGAAATGTTCGGTTTGCTGGAAGATGTATACTTTTGTTTGGACAGGGGCATAA
TCGTAGCATATGAACTCTCGGACGGCTTCTTTTCAGATCTGGCTGGCAGACGCCAAGTGCGCCGCGCCGCCGATACGCTT
ATTGAAGCGGGGAAAGAAGGCATCGTCCTGAACGGATAA

Upstream 100 bases:

>100_bases
GAAGGCATCACGCCGTTTGACTTTATGGAAGAAAAAGCGTAAATAAAACCCGGAGCATAAACATGCGCCGGGTTTTCGCC
TGTGGAAGTCATTTCAAAGT

Downstream 100 bases:

>100_bases
GAGGTGTAGTCTGTGCTTGTATGTCCGAACTGCAAAAGTAAAGATATCGGCAAAATCGGCGTAAACCAATACTATTGCTG
GGGCTGCTTCATTGAGCTGA

Product: YrrD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MLPGFLAKPIRVQQKVVDHTLRTCHAAEGRTVYDENTGRSLGMISDVCFSLDGRFLGFVLEQKRLFHNRHLFLEASDIKE
MDQEAVAAGHAHLQPLPKSCFTFEQIKMQPVKSPDGEMFGLLEDVYFCLDRGIIVAYELSDGFFSDLAGRRQVRRAADTL
IEAGKEGIVLNG

Sequences:

>Translated_172_residues
MLPGFLAKPIRVQQKVVDHTLRTCHAAEGRTVYDENTGRSLGMISDVCFSLDGRFLGFVLEQKRLFHNRHLFLEASDIKE
MDQEAVAAGHAHLQPLPKSCFTFEQIKMQPVKSPDGEMFGLLEDVYFCLDRGIIVAYELSDGFFSDLAGRRQVRRAADTL
IEAGKEGIVLNG
>Mature_172_residues
MLPGFLAKPIRVQQKVVDHTLRTCHAAEGRTVYDENTGRSLGMISDVCFSLDGRFLGFVLEQKRLFHNRHLFLEASDIKE
MDQEAVAAGHAHLQPLPKSCFTFEQIKMQPVKSPDGEMFGLLEDVYFCLDRGIIVAYELSDGFFSDLAGRRQVRRAADTL
IEAGKEGIVLNG

Specific function: Unknown

COG id: COG3881

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007903
- InterPro:   IPR011033 [H]

Pfam domain/function: PF05239 PRC [H]

EC number: NA

Molecular weight: Translated: 19273; Mature: 19273

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPGFLAKPIRVQQKVVDHTLRTCHAAEGRTVYDENTGRSLGMISDVCFSLDGRFLGFVL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHH
EQKRLFHNRHLFLEASDIKEMDQEAVAAGHAHLQPLPKSCFTFEQIKMQPVKSPDGEMFG
HHHHHHHCCEEEEEHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCCCCCCHHHH
LLEDVYFCLDRGIIVAYELSDGFFSDLAGRRQVRRAADTLIEAGKEGIVLNG
HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MLPGFLAKPIRVQQKVVDHTLRTCHAAEGRTVYDENTGRSLGMISDVCFSLDGRFLGFVL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHH
EQKRLFHNRHLFLEASDIKEMDQEAVAAGHAHLQPLPKSCFTFEQIKMQPVKSPDGEMFG
HHHHHHHCCEEEEEHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCCCCCCHHHH
LLEDVYFCLDRGIIVAYELSDGFFSDLAGRRQVRRAADTLIEAGKEGIVLNG
HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]