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The map label for this gene is yrhI [H]

Identifier: 154686857

GI number: 154686857

Start: 2547716

End: 2548318

Strand: Reverse

Name: yrhI [H]

Synonym: RBAM_024270

Alternate gene names: 154686857

Gene position: 2548318-2547716 (Counterclockwise)

Preceding gene: 154686858

Following gene: 154686856

Centisome position: 65.03

GC content: 43.45

Gene sequence:

>603_bases
ATGAATATTCATTCCGCGTTTAGAAAGGGGGATGAAATGACAGCTTCAAATAAGGTTGAACTCATTATGAAAGCGTCGCT
TACTTTGTTTACAGATAGAGGATTTGACGCCACGACGATTCCGATGATTGCCGCTCAGGCCGATGTCGGAACCGGCACAA
TTTACCGTTACTTTGACAGTAAAGAGACACTTGTGAACGTACTGTATCAGGAAAGTGCGCAGCGTTTTATGAAAAAAGTC
AAAACGGACTTTCAGGGGATATCTGTTAGAGAAGGGTTTCATCACCTGTTTTATTGTCTGATTGATTTTACGAAGGAAAG
TGAGTATGCATTGTTTTTTCTTGAAACGAATAAGGACGCCTACTTTCTGAATGAAACGAGCCGTAAGCTTCTTGATGAAA
TAACACAGATGCTTGACGTCTTTTTTCAGCGCGGCAAGTCTGAAGGCGTGCTCCGCAATCTGCCGTCCAATGTGCTGATG
GCGCTGCTGCTCGGGGCATATCTCAAACTCTATCAGCTTGTCCGGACGGGAAGCGTCGAAATAACAAAACCGTTTCTGAA
AGAATTGGAACAATGTTCTTGGGATGCCATCAGAACTCATTAA

Upstream 100 bases:

>100_bases
ATTTTTGGTTATTTCACATATATTTTATATTAAAAAAAGTTTTTTTCTTATACAATGGTAATCAAATGACCGTACATTTT
AAATATTTTGAACAAACGGA

Downstream 100 bases:

>100_bases
TTATTCGCCGAAGGAAGGAAGATCGATATGAAACAGCTAAGCGCTATACCACAGCCGAAAACATACGGGCCTCTGAAAAA
TCTCCCTCACTTGGAAAAAG

Product: YrhI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MNIHSAFRKGDEMTASNKVELIMKASLTLFTDRGFDATTIPMIAAQADVGTGTIYRYFDSKETLVNVLYQESAQRFMKKV
KTDFQGISVREGFHHLFYCLIDFTKESEYALFFLETNKDAYFLNETSRKLLDEITQMLDVFFQRGKSEGVLRNLPSNVLM
ALLLGAYLKLYQLVRTGSVEITKPFLKELEQCSWDAIRTH

Sequences:

>Translated_200_residues
MNIHSAFRKGDEMTASNKVELIMKASLTLFTDRGFDATTIPMIAAQADVGTGTIYRYFDSKETLVNVLYQESAQRFMKKV
KTDFQGISVREGFHHLFYCLIDFTKESEYALFFLETNKDAYFLNETSRKLLDEITQMLDVFFQRGKSEGVLRNLPSNVLM
ALLLGAYLKLYQLVRTGSVEITKPFLKELEQCSWDAIRTH
>Mature_200_residues
MNIHSAFRKGDEMTASNKVELIMKASLTLFTDRGFDATTIPMIAAQADVGTGTIYRYFDSKETLVNVLYQESAQRFMKKV
KTDFQGISVREGFHHLFYCLIDFTKESEYALFFLETNKDAYFLNETSRKLLDEITQMLDVFFQRGKSEGVLRNLPSNVLM
ALLLGAYLKLYQLVRTGSVEITKPFLKELEQCSWDAIRTH

Specific function: Negatively regulates the transcription of the bscR- CYP102A3 operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23031; Mature: 23031

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIHSAFRKGDEMTASNKVELIMKASLTLFTDRGFDATTIPMIAAQADVGTGTIYRYFDS
CCCHHHHHCCCCCCCCCHHHHHEEHHEEEEECCCCCCCHHHHHEECCCCCCCCEEEEECC
KETLVNVLYQESAQRFMKKVKTDFQGISVREGFHHLFYCLIDFTKESEYALFFLETNKDA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCE
YFLNETSRKLLDEITQMLDVFFQRGKSEGVLRNLPSNVLMALLLGAYLKLYQLVRTGSVE
EEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCE
ITKPFLKELEQCSWDAIRTH
ECHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MNIHSAFRKGDEMTASNKVELIMKASLTLFTDRGFDATTIPMIAAQADVGTGTIYRYFDS
CCCHHHHHCCCCCCCCCHHHHHEEHHEEEEECCCCCCCHHHHHEECCCCCCCCEEEEECC
KETLVNVLYQESAQRFMKKVKTDFQGISVREGFHHLFYCLIDFTKESEYALFFLETNKDA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCE
YFLNETSRKLLDEITQMLDVFFQRGKSEGVLRNLPSNVLMALLLGAYLKLYQLVRTGSVE
EEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCE
ITKPFLKELEQCSWDAIRTH
ECHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]