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The map label for this gene is yjdI [H]

Identifier: 154686853

GI number: 154686853

Start: 2541610

End: 2542092

Strand: Reverse

Name: yjdI [H]

Synonym: RBAM_024230

Alternate gene names: 154686853

Gene position: 2542092-2541610 (Counterclockwise)

Preceding gene: 154686854

Following gene: 154686852

Centisome position: 64.87

GC content: 44.93

Gene sequence:

>483_bases
ATGGCGAAAAAAACAGTGAAAACAAATGCTGTCCGTATCATTGAGCAGCAAAACATTCCCTATGAGCTATTAGGTTACAA
AACAGAAGGGGGACAGCCCGCAGACGGTCTTTCCGTTTCACAAAAAATCGGATACGCTGCCGAATATGTTTATAAAACCT
TAGTGGCATCTGCAGGAACTGATCGTTATTACGTCTTTGTCGTTCCCGTTGCAAAAGAACTGAATCTGAAAAAAGCTGCG
AAGGCGGCAGGTGAGAAGAAAATAGAAATGATTGCCATGAAGGACCTTTTGGGAGTAACCGGCTATATGCGCGGCGGCTG
CTCTCCGATCGGCATGAAAAAAAGGTTTCCGACTTTTATTGATAGATCCGCTGAAACACTGGAGTTTATGATTGTCAGTG
CGGGGAAAATCGGAATGCAGCTGAAAGCAGCGCCTCAAGATTTAGCCGAAGCAAGCGGGGCGGTATTTACAGACATTGTA
TAA

Upstream 100 bases:

>100_bases
TTTGCACTTGAGTATTACAAAGCACGCAACTGAGCGGTCATTTTATTAAAATCGAAGTTGAAAATAAAGCAGAAAGAAAT
ACAGAAAACGGAGGAAAAGC

Downstream 100 bases:

>100_bases
ATGTCCGATGAATCTAATAGAACACGTTTCAAGGGAGAATGATAATGAAAAAAAGATATGAAAACTTGAATGGCGTGAAG
AATGAACATGGATTCAGGGA

Product: YjdI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAKKTVKTNAVRIIEQQNIPYELLGYKTEGGQPADGLSVSQKIGYAAEYVYKTLVASAGTDRYYVFVVPVAKELNLKKAA
KAAGEKKIEMIAMKDLLGVTGYMRGGCSPIGMKKRFPTFIDRSAETLEFMIVSAGKIGMQLKAAPQDLAEASGAVFTDIV

Sequences:

>Translated_160_residues
MAKKTVKTNAVRIIEQQNIPYELLGYKTEGGQPADGLSVSQKIGYAAEYVYKTLVASAGTDRYYVFVVPVAKELNLKKAA
KAAGEKKIEMIAMKDLLGVTGYMRGGCSPIGMKKRFPTFIDRSAETLEFMIVSAGKIGMQLKAAPQDLAEASGAVFTDIV
>Mature_159_residues
AKKTVKTNAVRIIEQQNIPYELLGYKTEGGQPADGLSVSQKIGYAAEYVYKTLVASAGTDRYYVFVVPVAKELNLKKAAK
AAGEKKIEMIAMKDLLGVTGYMRGGCSPIGMKKRFPTFIDRSAETLEFMIVSAGKIGMQLKAAPQDLAEASGAVFTDIV

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786688, Length=154, Percent_Identity=40.2597402597403, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 17291; Mature: 17160

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKTVKTNAVRIIEQQNIPYELLGYKTEGGQPADGLSVSQKIGYAAEYVYKTLVASAGT
CCCCCCCCHHEEEEECCCCCEEHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
DRYYVFVVPVAKELNLKKAAKAAGEKKIEMIAMKDLLGVTGYMRGGCSPIGMKKRFPTFI
CEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
DRSAETLEFMIVSAGKIGMQLKAAPQDLAEASGAVFTDIV
CCCHHHEEEEEEECCCCCEEEECCHHHHHHHCCCEEECCC
>Mature Secondary Structure 
AKKTVKTNAVRIIEQQNIPYELLGYKTEGGQPADGLSVSQKIGYAAEYVYKTLVASAGT
CCCCCCCHHEEEEECCCCCEEHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
DRYYVFVVPVAKELNLKKAAKAAGEKKIEMIAMKDLLGVTGYMRGGCSPIGMKKRFPTFI
CEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
DRSAETLEFMIVSAGKIGMQLKAAPQDLAEASGAVFTDIV
CCCHHHEEEEEEECCCCCEEEECCHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]