| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is manR [H]
Identifier: 154686851
GI number: 154686851
Start: 2538466
End: 2540418
Strand: Reverse
Name: manR [H]
Synonym: RBAM_024210
Alternate gene names: 154686851
Gene position: 2540418-2538466 (Counterclockwise)
Preceding gene: 154686852
Following gene: 154686850
Centisome position: 64.83
GC content: 40.09
Gene sequence:
>1953_bases ATGAAATACATGAATTCAAGGCAGAAAAAGATTTTGTATCTGTTGTTATCTGAACCTGATGACTACTTAGTTGTGCAAGA TTTCGCAGACAGGGTCCGCTGTTCTGAAAAAACGATCAGGAATGATTTGAAAACGATTGAAGATTTCCTGAATGAACATG CTCAAGCTCAGCTGATCCGCAAACCGGGATTAGGCGTCTATTTACATATATCTGAACAGGAAAGGTCACGGTTAAGCCGG CAAATTTATAATGAGCACTTTACGTGCAGGCACAAGACCGATGAAGAAAGAATACTTCACATCGCTTATGATTTATTAAT GAATTCAAAGCCCGTTTCCGCAAAAGAAATTGCTGCACAGCATTTTGTAAACAGAGCTTCCATTAAAAAGGATGTAAGTG CGGTTGAAGAGTGGCTGAAGCGATTTGATCTCATACTGGTTTCTAAACAGCGGCTCGGCTTAAAGATTGAAGGGGACGAA AAAAACAAAAGAAAAGCATTGGCGCGAATTTCAGATTTGATTGATAATGCGGAATTTACAAGCCAATTTATAAAAAGTAA GTTTTTAAGTTATGAAGCGGACTTTGTGAGAAAAGAAATCAAGTTATTACAAAAAAACCATTCTATCTATTTTACGGATG AAACATTTGAAAGTTTGCTGCTGCATACATTGCTGACTATCCGCCGTATCAAAATGAAACAGCCGGTCGCCATTTCTGCA AGACAGCTGGACGCGGTAAAAAAGAAGAAAGAATATGAATGGACACTGGCTTGTTTAAAACGGCTTGAGCCGGTATTTGC CATCCGGTTTCCTGAGGAAGAAGCCGTCTATTTAACTTTACATATAATAGGCGGGAAAGTCCGCTATCCATCGCAGCTAG AAAAGAAGCTTGATCTTGAAGATTCTGAGCTTTCCAAAGTCGTCAGGCATTTGATCAATCGTGTTTCAGAACTGCAAATG CTGGATTTTTATAAAGACCAGGAACTGATCAACGGATTGAACATTCATCTCGATCCGGTGTTGAAGCGGCTGAGCTATGA TCTCTCTGTTTCAAATCCCATGCTTCACGACATCAAAAAAATGTACCCTTATTTGTTTCATCTTATCATTGACGTTTTAG AAGACATCAATCAAACATTTGATCTTTATATTCCTGAAGAAGAGGCGGCCTATTTGACGCTGCATTTTCAGGCAGCGATC GAACGGCTGCGCCGAAACAGTCATAACCCTAAAAGGACGATCATCGTCTGCCATATGGGCATTGGCATGTCACAATTGCT GCGGACTAAAATTGAACGCAAATTTCATTACATTACGGTAAAAGACTGTATCGCAAAAGCGGAGCTGACAGAGTATATCA AAAAGCATAAAGATATAGATTTCGTCATTTCTACGATAGGGCTTGGAAATGTAACGATCCCTCATATTGTCGTATCACCG CTTTTGGAGTCTGCTGATGAAAAGAAGCTCAGCGCATTTCTGCAACAGCTTGATATATCACATCGCCGGGAGCAAAAAAC GTTTAAAATGCTGAACGATACGACTCCGTTTCTCGTTTTTTTACAGCAAGAGACAGAGCACCGTTATCAGGTCATTGAAA AGCTGGCGCAGGCTTTGTATGAAAAAGGCTATGTAGAAAAAGAGTATGGCATTCATGCAGTAATGAGAGAAAAAATGTCG GCGACAAATATCGGGGCGGGTATTGCCATCCCTCACGCGAACTCTAAATATATCAAACAATCAGCCATTGCAATCGCCAC CTTAAAAGAGCCGATTGAATGGGGGACAGAAAAGGTGTCGGTCGTTTTTATGCTTGCTGTCAAACACGAAGATCAAAACA AGGTAAAGCAATTATTCAGTGAGCTTTCCTATCTTAGCGAGCAGCCGGCATTTATTCAAAAACTGACGGAAGAAAAAAAT GTGATGATGTTTTTATCGTATTTAAACTATTAA
Upstream 100 bases:
>100_bases CTTTTGTTTCACTATAAAATGAAAACGGTTTCGTATGCGCAGTATATTTAACCTATCACAATTGCTCCAGCAGAAACGGA TAGGAAGGATAGAAAAACAG
Downstream 100 bases:
>100_bases AAGCAGGGAATGGCTCCCTGCTTTTTTTCTGTTTATAGGGAAAAATGCCGTTATTTCCGGAACTTATGGTAAAAAAACGT GCTTATCACAGGCTGATTTC
Product: ManR
Products: NA
Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MKYMNSRQKKILYLLLSEPDDYLVVQDFADRVRCSEKTIRNDLKTIEDFLNEHAQAQLIRKPGLGVYLHISEQERSRLSR QIYNEHFTCRHKTDEERILHIAYDLLMNSKPVSAKEIAAQHFVNRASIKKDVSAVEEWLKRFDLILVSKQRLGLKIEGDE KNKRKALARISDLIDNAEFTSQFIKSKFLSYEADFVRKEIKLLQKNHSIYFTDETFESLLLHTLLTIRRIKMKQPVAISA RQLDAVKKKKEYEWTLACLKRLEPVFAIRFPEEEAVYLTLHIIGGKVRYPSQLEKKLDLEDSELSKVVRHLINRVSELQM LDFYKDQELINGLNIHLDPVLKRLSYDLSVSNPMLHDIKKMYPYLFHLIIDVLEDINQTFDLYIPEEEAAYLTLHFQAAI ERLRRNSHNPKRTIIVCHMGIGMSQLLRTKIERKFHYITVKDCIAKAELTEYIKKHKDIDFVISTIGLGNVTIPHIVVSP LLESADEKKLSAFLQQLDISHRREQKTFKMLNDTTPFLVFLQQETEHRYQVIEKLAQALYEKGYVEKEYGIHAVMREKMS ATNIGAGIAIPHANSKYIKQSAIAIATLKEPIEWGTEKVSVVFMLAVKHEDQNKVKQLFSELSYLSEQPAFIQKLTEEKN VMMFLSYLNY
Sequences:
>Translated_650_residues MKYMNSRQKKILYLLLSEPDDYLVVQDFADRVRCSEKTIRNDLKTIEDFLNEHAQAQLIRKPGLGVYLHISEQERSRLSR QIYNEHFTCRHKTDEERILHIAYDLLMNSKPVSAKEIAAQHFVNRASIKKDVSAVEEWLKRFDLILVSKQRLGLKIEGDE KNKRKALARISDLIDNAEFTSQFIKSKFLSYEADFVRKEIKLLQKNHSIYFTDETFESLLLHTLLTIRRIKMKQPVAISA RQLDAVKKKKEYEWTLACLKRLEPVFAIRFPEEEAVYLTLHIIGGKVRYPSQLEKKLDLEDSELSKVVRHLINRVSELQM LDFYKDQELINGLNIHLDPVLKRLSYDLSVSNPMLHDIKKMYPYLFHLIIDVLEDINQTFDLYIPEEEAAYLTLHFQAAI ERLRRNSHNPKRTIIVCHMGIGMSQLLRTKIERKFHYITVKDCIAKAELTEYIKKHKDIDFVISTIGLGNVTIPHIVVSP LLESADEKKLSAFLQQLDISHRREQKTFKMLNDTTPFLVFLQQETEHRYQVIEKLAQALYEKGYVEKEYGIHAVMREKMS ATNIGAGIAIPHANSKYIKQSAIAIATLKEPIEWGTEKVSVVFMLAVKHEDQNKVKQLFSELSYLSEQPAFIQKLTEEKN VMMFLSYLNY >Mature_650_residues MKYMNSRQKKILYLLLSEPDDYLVVQDFADRVRCSEKTIRNDLKTIEDFLNEHAQAQLIRKPGLGVYLHISEQERSRLSR QIYNEHFTCRHKTDEERILHIAYDLLMNSKPVSAKEIAAQHFVNRASIKKDVSAVEEWLKRFDLILVSKQRLGLKIEGDE KNKRKALARISDLIDNAEFTSQFIKSKFLSYEADFVRKEIKLLQKNHSIYFTDETFESLLLHTLLTIRRIKMKQPVAISA RQLDAVKKKKEYEWTLACLKRLEPVFAIRFPEEEAVYLTLHIIGGKVRYPSQLEKKLDLEDSELSKVVRHLINRVSELQM LDFYKDQELINGLNIHLDPVLKRLSYDLSVSNPMLHDIKKMYPYLFHLIIDVLEDINQTFDLYIPEEEAAYLTLHFQAAI ERLRRNSHNPKRTIIVCHMGIGMSQLLRTKIERKFHYITVKDCIAKAELTEYIKKHKDIDFVISTIGLGNVTIPHIVVSP LLESADEKKLSAFLQQLDISHRREQKTFKMLNDTTPFLVFLQQETEHRYQVIEKLAQALYEKGYVEKEYGIHAVMREKMS ATNIGAGIAIPHANSKYIKQSAIAIATLKEPIEWGTEKVSVVFMLAVKHEDQNKVKQLFSELSYLSEQPAFIQKLTEEKN VMMFLSYLNY
Specific function: May regulate the expression of the mannose operon [H]
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788726, Length=151, Percent_Identity=31.7880794701987, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2 [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 76006; Mature: 76006
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYMNSRQKKILYLLLSEPDDYLVVQDFADRVRCSEKTIRNDLKTIEDFLNEHAQAQLIR CCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KPGLGVYLHISEQERSRLSRQIYNEHFTCRHKTDEERILHIAYDLLMNSKPVSAKEIAAQ CCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH HFVNRASIKKDVSAVEEWLKRFDLILVSKQRLGLKIEGDEKNKRKALARISDLIDNAEFT HHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCEEEECCCCHHHHHHHHHHHHHCCHHHH SQFIKSKFLSYEADFVRKEIKLLQKNHSIYFTDETFESLLLHTLLTIRRIKMKQPVAISA HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHH RQLDAVKKKKEYEWTLACLKRLEPVFAIRFPEEEAVYLTLHIIGGKVRYPSQLEKKLDLE HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHCCCC DSELSKVVRHLINRVSELQMLDFYKDQELINGLNIHLDPVLKRLSYDLSVSNPMLHDIKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCHHHHHHHH MYPYLFHLIIDVLEDINQTFDLYIPEEEAAYLTLHFQAAIERLRRNSHNPKRTIIVCHMG HHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEECC IGMSQLLRTKIERKFHYITVKDCIAKAELTEYIKKHKDIDFVISTIGLGNVTIPHIVVSP CCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHH LLESADEKKLSAFLQQLDISHRREQKTFKMLNDTTPFLVFLQQETEHRYQVIEKLAQALY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH EKGYVEKEYGIHAVMREKMSATNIGAGIAIPHANSKYIKQSAIAIATLKEPIEWGTEKVS HCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHEE VVFMLAVKHEDQNKVKQLFSELSYLSEQPAFIQKLTEEKNVMMFLSYLNY EEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MKYMNSRQKKILYLLLSEPDDYLVVQDFADRVRCSEKTIRNDLKTIEDFLNEHAQAQLIR CCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KPGLGVYLHISEQERSRLSRQIYNEHFTCRHKTDEERILHIAYDLLMNSKPVSAKEIAAQ CCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH HFVNRASIKKDVSAVEEWLKRFDLILVSKQRLGLKIEGDEKNKRKALARISDLIDNAEFT HHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCEEEECCCCHHHHHHHHHHHHHCCHHHH SQFIKSKFLSYEADFVRKEIKLLQKNHSIYFTDETFESLLLHTLLTIRRIKMKQPVAISA HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHH RQLDAVKKKKEYEWTLACLKRLEPVFAIRFPEEEAVYLTLHIIGGKVRYPSQLEKKLDLE HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHCCCC DSELSKVVRHLINRVSELQMLDFYKDQELINGLNIHLDPVLKRLSYDLSVSNPMLHDIKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCHHHHHHHH MYPYLFHLIIDVLEDINQTFDLYIPEEEAAYLTLHFQAAIERLRRNSHNPKRTIIVCHMG HHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEECC IGMSQLLRTKIERKFHYITVKDCIAKAELTEYIKKHKDIDFVISTIGLGNVTIPHIVVSP CCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHH LLESADEKKLSAFLQQLDISHRREQKTFKMLNDTTPFLVFLQQETEHRYQVIEKLAQALY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH EKGYVEKEYGIHAVMREKMSATNIGAGIAIPHANSKYIKQSAIAIATLKEPIEWGTEKVS HCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHEE VVFMLAVKHEDQNKVKQLFSELSYLSEQPAFIQKLTEEKNVMMFLSYLNY EEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]