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The map label for this gene is glyQ

Identifier: 154686787

GI number: 154686787

Start: 2477258

End: 2478145

Strand: Reverse

Name: glyQ

Synonym: RBAM_023570

Alternate gene names: 154686787

Gene position: 2478145-2477258 (Counterclockwise)

Preceding gene: 154686788

Following gene: 154686786

Centisome position: 63.24

GC content: 46.17

Gene sequence:

>888_bases
ATGAACATTCAAGATATGATTTTAACCTTGCAGAAGCACTGGTCGAATGAAGGCTGTGTGCTCATGCAGTCGTATGATGT
GGAGAAAGGCGCAGGCACAATGAGCCCGTATACATTTTTACGAAGCATCGGGCCGGAACCGTGGAGAGTGGCTTACGTTG
AGCCGTCCAGGCGGCCTGCTGACGGACGGTACGGTGAAAACCCGAACAGGCTCTATCAGCATCACCAATTCCAAGTCATT
ATCAAGCCGTCGCCTGATAACATTCAAGAGCTTTACCTTGATTCATTGCGTGCGCTCGGCATTGACCCGCTTGAACATGA
TATCCGTTTCGTAGAAGACAACTGGGAAAACCCGTCTTTAGGCTGTGCAGGTCTCGGCTGGGAAGTATGGCTTGACGGGA
TGGAAATTACTCAGTTTACATACTTCCAGCAGGTGGGCGGAATTGAATGTAAACCGGTATCCGTTGAAATCACATATGGT
ATTGAACGTCTCGCGTCATATATTCAGGATAAAGAAAACGTCTTTGATCTTGAATGGACGTCAGGATTTACTGTGAAAGA
TTTATTTATGATGGCTGAATATGAGCATTCCGTTTATACTTTTGAAACATCTGACGTGGATATGCTTTTCCATTTGTTCA
GCACCTATGAAAAAGAAGCGATCAGACAAATGGATAACGGGCTCGTGCATCCGGCCTATGATTATGTGCTGAAATGCTCT
CACACATTTAATCTGCTCGATGCAAAAGGCGCGATCTCGGTGACGGAGCGGACGGGTTATATCGGCCGTGTCCGCAACTT
AGCGAGAAAAGTGGCAAAAACGTATTATGAAGAACGGGAAAAATTAGGGTTCCCAATGCTTAAAGAGGAGGGCTCTTCCC
ATGAGTAA

Upstream 100 bases:

>100_bases
GAACTCTCGTCCCTATGTTTGCGGCCGGCAAGCATAGAGACGGGAGTTTTTTGGTTGCCGCCGCACTTGTAAAAGAATGG
AGAAAGTGGAGGTGCTTGAA

Downstream 100 bases:

>100_bases
ACAAGACTTGCTTTTAGAGATCGGACTCGAGGAAATGCCGGCGCGGTTTTTACATGACAGCATGGTGCAGCTCGGTGAAA
AGCTGACCGGCTGGCTGGCT

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNIQDMILTLQKHWSNEGCVLMQSYDVEKGAGTMSPYTFLRSIGPEPWRVAYVEPSRRPADGRYGENPNRLYQHHQFQVI
IKPSPDNIQELYLDSLRALGIDPLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGIECKPVSVEITYG
IERLASYIQDKENVFDLEWTSGFTVKDLFMMAEYEHSVYTFETSDVDMLFHLFSTYEKEAIRQMDNGLVHPAYDYVLKCS
HTFNLLDAKGAISVTERTGYIGRVRNLARKVAKTYYEEREKLGFPMLKEEGSSHE

Sequences:

>Translated_295_residues
MNIQDMILTLQKHWSNEGCVLMQSYDVEKGAGTMSPYTFLRSIGPEPWRVAYVEPSRRPADGRYGENPNRLYQHHQFQVI
IKPSPDNIQELYLDSLRALGIDPLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGIECKPVSVEITYG
IERLASYIQDKENVFDLEWTSGFTVKDLFMMAEYEHSVYTFETSDVDMLFHLFSTYEKEAIRQMDNGLVHPAYDYVLKCS
HTFNLLDAKGAISVTERTGYIGRVRNLARKVAKTYYEEREKLGFPMLKEEGSSHE
>Mature_295_residues
MNIQDMILTLQKHWSNEGCVLMQSYDVEKGAGTMSPYTFLRSIGPEPWRVAYVEPSRRPADGRYGENPNRLYQHHQFQVI
IKPSPDNIQELYLDSLRALGIDPLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGIECKPVSVEITYG
IERLASYIQDKENVFDLEWTSGFTVKDLFMMAEYEHSVYTFETSDVDMLFHLFSTYEKEAIRQMDNGLVHPAYDYVLKCS
HTFNLLDAKGAISVTERTGYIGRVRNLARKVAKTYYEEREKLGFPMLKEEGSSHE

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=295, Percent_Identity=61.6949152542373, Blast_Score=380, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_BACA2 (A7Z6U1)

Other databases:

- EMBL:   CP000560
- RefSeq:   YP_001421948.1
- ProteinModelPortal:   A7Z6U1
- SMR:   A7Z6U1
- STRING:   A7Z6U1
- EnsemblBacteria:   EBBACT00000005155
- GeneID:   5461365
- GenomeReviews:   CP000560_GR
- KEGG:   bay:RBAM_023570
- eggNOG:   COG0752
- GeneTree:   EBGT00050000002437
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- ProtClustDB:   PRK09348
- BioCyc:   BAMY326423:RBAM_023570-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 34147; Mature: 34147

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQDMILTLQKHWSNEGCVLMQSYDVEKGAGTMSPYTFLRSIGPEPWRVAYVEPSRRPA
CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCC
DGRYGENPNRLYQHHQFQVIIKPSPDNIQELYLDSLRALGIDPLEHDIRFVEDNWENPSL
CCCCCCCHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCC
GCAGLGWEVWLDGMEITQFTYFQQVGGIECKPVSVEITYGIERLASYIQDKENVFDLEWT
CCCCCCHHHEECCCHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHCCCCEEEEECC
SGFTVKDLFMMAEYEHSVYTFETSDVDMLFHLFSTYEKEAIRQMDNGLVHPAYDYVLKCS
CCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECC
HTFNLLDAKGAISVTERTGYIGRVRNLARKVAKTYYEEREKLGFPMLKEEGSSHE
CCEEEEECCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure
MNIQDMILTLQKHWSNEGCVLMQSYDVEKGAGTMSPYTFLRSIGPEPWRVAYVEPSRRPA
CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCC
DGRYGENPNRLYQHHQFQVIIKPSPDNIQELYLDSLRALGIDPLEHDIRFVEDNWENPSL
CCCCCCCHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCC
GCAGLGWEVWLDGMEITQFTYFQQVGGIECKPVSVEITYGIERLASYIQDKENVFDLEWT
CCCCCCHHHEECCCHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHCCCCEEEEECC
SGFTVKDLFMMAEYEHSVYTFETSDVDMLFHLFSTYEKEAIRQMDNGLVHPAYDYVLKCS
CCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECC
HTFNLLDAKGAISVTERTGYIGRVRNLARKVAKTYYEEREKLGFPMLKEEGSSHE
CCEEEEECCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA