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The map label for this gene is yqfO [H]

Identifier: 154686778

GI number: 154686778

Start: 2467083

End: 2468204

Strand: Reverse

Name: yqfO [H]

Synonym: RBAM_023480

Alternate gene names: 154686778

Gene position: 2468204-2467083 (Counterclockwise)

Preceding gene: 154686779

Following gene: 154686775

Centisome position: 62.99

GC content: 47.42

Gene sequence:

>1122_bases
ATGCTTAAACATGTGAACGGACAGGAAATCATCCAGCTGTTTGAACAATTTTCACCGAAGGCTTTTGCGGTGGAAGGAGA
TAAAATCGGCCTGCAGATCGGTACATTGAATAAGCCGGTGAAAAATGTCATGGTGACACTGGATGTTCTGGAACAAACGG
TAGATGAAGCCATTGAGAAAAAAGTTGACTTAATTATCGCCCACCATCCGCCGATTTTTCGGCCGCTTAAACAGATCACC
ACTGATCAGCCTGGCGGAAGACTGATTGAGAAATGTATAAAGCATGATATTGCCGTATATGCGGCTCATACGAATCTTGA
TGTAGCGGACGGCGGTGTGAATGATCTGCTTGCCGAAGCTCTCGGCCTGACAGACACAGAAGTGCTCGTCCCGACATATT
CGGATCCGCTGAAAAAGCTTGCCGTATATGTTCCGAAAGACTATGAAGAAGCTGTAAGAACTGCACTTGGCAACGCCGGA
GCGGGACATATCGGCAATTACAGCCATTGCGCGTTCTCCTCTGAGGGAATCGGCAGCTTTAAGCCGCTGGAAGGGGCAGA
ACCGTTTATCGGACAGACGGGAGAGCTGGAACTCGTCCATGAAGTGAGACTTGAGACCGTTTTTCCGGCAAGTATGGAGA
AAACCGTCGTAAAAGCGCTGAAAAAAAGCCATCCGTATGAAGAGGTGGCATATGATATTTATCCGGTGGAGCAGTCTCCG
CTTGAAAAAGGGCTCGGCCGCATCGGAAAACTTCAGCAAGAAATGACGCTTGAAGAGTTTGCGCTGTTTGTGAAAGAAAA
GTTTGACGTTAACGGAGTCCGGATGGTCGGAGAGCGAAACAGCAAGGTGAAAAAAGTCGCGGTTCTTGGCGGTGACGGAA
ATAAATATATTTATCAGGCAAAGCGGAAAGGTGCAGATGTTTACGTGACGGGCGATCTTTATTTCCATGTAGCGCATGAT
GCGATGATGATGGGATTAAACGTCGTGGACCCGGGGCATTATGCTGAAAAGATCATGAGAAAAGGCACGGCTGAGAAGCT
TACGGCAATGGCCGGAGAGAAAAACTATGATGTGCGCATTTTCGCTTCCGAAACAGATACAAACCCATTTACTTTCTTAT
AA

Upstream 100 bases:

>100_bases
CAAATTTATGAACAGATCAGCCGCAGCGCAAAGCATGAAAATCATGAAAAATTAGCTGAATTGAAAGAGCGGATTTCTCT
GCTGAAGGAGGTAATCGGAC

Downstream 100 bases:

>100_bases
AAAAACTGAGGCCCCGGGCCTCAGTTTTTTATTTTTACTTTCGGAAGGATTTTTTTAAGCGGCACACTGTGTTCAAGCTG
CCATGTCGATTCATCGTTGT

Product: YqfO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MLKHVNGQEIIQLFEQFSPKAFAVEGDKIGLQIGTLNKPVKNVMVTLDVLEQTVDEAIEKKVDLIIAHHPPIFRPLKQIT
TDQPGGRLIEKCIKHDIAVYAAHTNLDVADGGVNDLLAEALGLTDTEVLVPTYSDPLKKLAVYVPKDYEEAVRTALGNAG
AGHIGNYSHCAFSSEGIGSFKPLEGAEPFIGQTGELELVHEVRLETVFPASMEKTVVKALKKSHPYEEVAYDIYPVEQSP
LEKGLGRIGKLQQEMTLEEFALFVKEKFDVNGVRMVGERNSKVKKVAVLGGDGNKYIYQAKRKGADVYVTGDLYFHVAHD
AMMMGLNVVDPGHYAEKIMRKGTAEKLTAMAGEKNYDVRIFASETDTNPFTFL

Sequences:

>Translated_373_residues
MLKHVNGQEIIQLFEQFSPKAFAVEGDKIGLQIGTLNKPVKNVMVTLDVLEQTVDEAIEKKVDLIIAHHPPIFRPLKQIT
TDQPGGRLIEKCIKHDIAVYAAHTNLDVADGGVNDLLAEALGLTDTEVLVPTYSDPLKKLAVYVPKDYEEAVRTALGNAG
AGHIGNYSHCAFSSEGIGSFKPLEGAEPFIGQTGELELVHEVRLETVFPASMEKTVVKALKKSHPYEEVAYDIYPVEQSP
LEKGLGRIGKLQQEMTLEEFALFVKEKFDVNGVRMVGERNSKVKKVAVLGGDGNKYIYQAKRKGADVYVTGDLYFHVAHD
AMMMGLNVVDPGHYAEKIMRKGTAEKLTAMAGEKNYDVRIFASETDTNPFTFL
>Mature_373_residues
MLKHVNGQEIIQLFEQFSPKAFAVEGDKIGLQIGTLNKPVKNVMVTLDVLEQTVDEAIEKKVDLIIAHHPPIFRPLKQIT
TDQPGGRLIEKCIKHDIAVYAAHTNLDVADGGVNDLLAEALGLTDTEVLVPTYSDPLKKLAVYVPKDYEEAVRTALGNAG
AGHIGNYSHCAFSSEGIGSFKPLEGAEPFIGQTGELELVHEVRLETVFPASMEKTVVKALKKSHPYEEVAYDIYPVEQSP
LEKGLGRIGKLQQEMTLEEFALFVKEKFDVNGVRMVGERNSKVKKVAVLGGDGNKYIYQAKRKGADVYVTGDLYFHVAHD
AMMMGLNVVDPGHYAEKIMRKGTAEKLTAMAGEKNYDVRIFASETDTNPFTFL

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI215272360, Length=371, Percent_Identity=26.9541778975741, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI56605983, Length=371, Percent_Identity=26.9541778975741, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI209862879, Length=371, Percent_Identity=26.9541778975741, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI215272362, Length=126, Percent_Identity=32.5396825396825, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI19921430, Length=143, Percent_Identity=37.7622377622378, Blast_Score=104, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 41134; Mature: 41134

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKHVNGQEIIQLFEQFSPKAFAVEGDKIGLQIGTLNKPVKNVMVTLDVLEQTVDEAIEK
CCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KVDLIIAHHPPIFRPLKQITTDQPGGRLIEKCIKHDIAVYAAHTNLDVADGGVNDLLAEA
HEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHH
LGLTDTEVLVPTYSDPLKKLAVYVPKDYEEAVRTALGNAGAGHIGNYSHCAFSSEGIGSF
HCCCCCEEEECCCCCHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
KPLEGAEPFIGQTGELELVHEVRLETVFPASMEKTVVKALKKSHPYEEVAYDIYPVEQSP
CCCCCCCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHEEEEECCCCH
LEKGLGRIGKLQQEMTLEEFALFVKEKFDVNGVRMVGERNSKVKKVAVLGGDGNKYIYQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEE
KRKGADVYVTGDLYFHVAHDAMMMGLNVVDPGHYAEKIMRKGTAEKLTAMAGEKNYDVRI
CCCCCEEEEECCEEEEEEHHHHHHCCEECCCCHHHHHHHHCCCHHHHHHHCCCCCCCEEE
FASETDTNPFTFL
EEECCCCCCEECC
>Mature Secondary Structure
MLKHVNGQEIIQLFEQFSPKAFAVEGDKIGLQIGTLNKPVKNVMVTLDVLEQTVDEAIEK
CCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KVDLIIAHHPPIFRPLKQITTDQPGGRLIEKCIKHDIAVYAAHTNLDVADGGVNDLLAEA
HEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHH
LGLTDTEVLVPTYSDPLKKLAVYVPKDYEEAVRTALGNAGAGHIGNYSHCAFSSEGIGSF
HCCCCCEEEECCCCCHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
KPLEGAEPFIGQTGELELVHEVRLETVFPASMEKTVVKALKKSHPYEEVAYDIYPVEQSP
CCCCCCCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHEEEEECCCCH
LEKGLGRIGKLQQEMTLEEFALFVKEKFDVNGVRMVGERNSKVKKVAVLGGDGNKYIYQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEE
KRKGADVYVTGDLYFHVAHDAMMMGLNVVDPGHYAEKIMRKGTAEKLTAMAGEKNYDVRI
CCCCCEEEEECCEEEEEEHHHHHHCCEECCCCHHHHHHHHCCCHHHHHHHCCCCCCCEEE
FASETDTNPFTFL
EEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]