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The map label for this gene is comGA [H]

Identifier: 154686736

GI number: 154686736

Start: 2432218

End: 2433288

Strand: Reverse

Name: comGA [H]

Synonym: RBAM_023050

Alternate gene names: 154686736

Gene position: 2433288-2432218 (Counterclockwise)

Preceding gene: 154686737

Following gene: 154686735

Centisome position: 62.1

GC content: 47.81

Gene sequence:

>1071_bases
GTGAAAAATATTGAAACATACAGCAGGAACATCATAAACGAGGCCTATACGGCAAGGGCTTCAGATATACACATTGTGCC
GAGAGAAAGGGATGCTTTCATTCATTTTCGCATCGGCCATGCTCTTGTGAAAAAAAGAGTCTTAAAAAAAGAGGAATGCG
TAAGGCTAATTTCTCATTTTAAGTTTTTATCGGCCATGGATATAGGAGAAAGACGTAAGCCGCAAAACGGGTCATTGTCT
CTGCCGCTTCCGACGGAAACCGTTCATTTAAGAATGTCAACCTTGCCGACAATGAATGATGAAAGTCTTGTCATCAGGCT
TTTGCCTAAGCGGCAGATTCCCCCTCTGGATAAACTGTCCTTATTTCGGGGGGCGGGCGCCGCACTATTGTCCTTTCTGA
AGCATTCGCACGGCCTGCTTCTGTTTACCGGCCCCACCGGATCTGGAAAAACGACCACTCTTTACTCGCTTGTCAACTAT
GCAAAAAGGCATTTCAACCGGCGTATTGTCACGCTTGAAGACCCCGTAGAAACAAGAGATGAGGATGTGTTGCAAGTTCA
GGTGAATGAAAAAGCCGGAGTCACATATTCCGCCGGTTTAAAAGCGATTCTAAGACATGATCCCGATATGATCATCTTAG
GGGAAATCAGAGATGCCGAGACGGCTGAAATCGCAGTCCGCGCGGCCATGACGGGACACCTCGTTCTTTCAAGCCTGCAT
ACAAGAGATGCTAAGGGCGCCATATACAGGCTGCTGGAGTTCGGCGTGAACATGACAGAAATTGAACAAACCGTCATTGC
TATTGCCGCTCAGCGTCTGGTTGATTTAACATGTCCGTTCTGCAAAGAGGAAAACTGTTCCGTGTACTGCCGGATGTACA
GGCAGACACGCCGTGCGGGCATTTATGAACTGCTCTACGGGAAAAACCTCACCCAATGCTTTCAGGAAGCAAAGGGAGAG
CACGCCAATTTTCAATATCAGACGCTCCGCAGGCTGATCAGAAAAGGAATCGCGCTCGGCTATGTCACGACCGACAATTA
CGATCGGTGGGTGTATCATGAAGCGGATTAA

Upstream 100 bases:

>100_bases
TTTTATTTTTTTACGTTTTACACACTGTAAAACGCATAATCTCTCCTTTGCCGGCTTCTGTGTATCTGATTTACAATACG
TGCGGAAGGAGGGAAGTCTT

Downstream 100 bases:

>100_bases
CCGAACCTGGCCCTTGAAGGATCAAGCAGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGGATACAGTCTGATTG
AAGGGCTCAGACTGCTGCAA

Product: ComGA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKNIETYSRNIINEAYTARASDIHIVPRERDAFIHFRIGHALVKKRVLKKEECVRLISHFKFLSAMDIGERRKPQNGSLS
LPLPTETVHLRMSTLPTMNDESLVIRLLPKRQIPPLDKLSLFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNY
AKRHFNRRIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTRRAGIYELLYGKNLTQCFQEAKGE
HANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD

Sequences:

>Translated_356_residues
MKNIETYSRNIINEAYTARASDIHIVPRERDAFIHFRIGHALVKKRVLKKEECVRLISHFKFLSAMDIGERRKPQNGSLS
LPLPTETVHLRMSTLPTMNDESLVIRLLPKRQIPPLDKLSLFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNY
AKRHFNRRIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTRRAGIYELLYGKNLTQCFQEAKGE
HANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD
>Mature_356_residues
MKNIETYSRNIINEAYTARASDIHIVPRERDAFIHFRIGHALVKKRVLKKEECVRLISHFKFLSAMDIGERRKPQNGSLS
LPLPTETVHLRMSTLPTMNDESLVIRLLPKRQIPPLDKLSLFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNY
AKRHFNRRIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTRRAGIYELLYGKNLTQCFQEAKGE
HANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD

Specific function: Required for uptake of DNA by competent cells [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=274, Percent_Identity=43.4306569343066, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1786296, Length=275, Percent_Identity=39.6363636363636, Blast_Score=185, Evalue=4e-48,
Organism=Escherichia coli, GI87082188, Length=183, Percent_Identity=43.7158469945355, Blast_Score=131, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 40558; Mature: 40558

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIETYSRNIINEAYTARASDIHIVPRERDAFIHFRIGHALVKKRVLKKEECVRLISHF
CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
KFLSAMDIGERRKPQNGSLSLPLPTETVHLRMSTLPTMNDESLVIRLLPKRQIPPLDKLS
HHHHHHCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHH
LFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNYAKRHFNRRIVTLEDPVETRD
HHHCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
EDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
CCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTRRAG
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
IYELLYGKNLTQCFQEAKGEHANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD
HHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEECCC
>Mature Secondary Structure
MKNIETYSRNIINEAYTARASDIHIVPRERDAFIHFRIGHALVKKRVLKKEECVRLISHF
CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
KFLSAMDIGERRKPQNGSLSLPLPTETVHLRMSTLPTMNDESLVIRLLPKRQIPPLDKLS
HHHHHHCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHH
LFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNYAKRHFNRRIVTLEDPVETRD
HHHCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
EDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
CCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTRRAG
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
IYELLYGKNLTQCFQEAKGEHANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD
HHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2507524; 8969508; 9384377; 9422590; 9723928 [H]