| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is comGD [H]
Identifier: 154686733
GI number: 154686733
Start: 2430454
End: 2430891
Strand: Reverse
Name: comGD [H]
Synonym: RBAM_023020
Alternate gene names: 154686733
Gene position: 2430891-2430454 (Counterclockwise)
Preceding gene: 154686734
Following gene: 154686732
Centisome position: 62.03
GC content: 45.89
Gene sequence:
>438_bases TTGAACAATAACAGGCGGACAGAAAATGGGTTTACCCTTCTTGAAAGCCTGATTGTGTTAAGCCTGGCGTCCGTCCTGCT GACGGTTTTGTTCACGACGGTTCCGCCGGCCTACACCCACCTTGCCGTGCGGCAAAAAACAGAACAGCTCCAAAAAGATA TTCAGCTTGCTCAGGAAACGGCTATCGCAGAACATAAAAGAACAAAAATCACTTTTCTTCCAAAAGAGCATAAATACAAA CTGCAGTCAGGCGGAAGGATTGTCGAGCGTTCTTTTGACTCGCTTCACATTACACTTGTGACTTTACCGGAGAGCCTTGA ATTTAACGAAAAAGGCCATCCGAATTCGGGAGGAAAGATTCAATTGAAGAGCGCCGGGTTCACCTATGAGATCACGGTTT ACTTAGGGAGCGGAAATGTCCATGCTAAACGGAAATAA
Upstream 100 bases:
>100_bases ATGCCGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAGAATACAGCCTGCCCGAATGGTAAACAGATCTTAAT TAGTGGCGGAGAAGTTACAG
Downstream 100 bases:
>100_bases GGGGTTCTCTACTATTGAAACACTATCAGCAATGGCCATTTGGCTGTTCCTTATGACGTCTATCATTCCGGTCTGGACGG GCATGCTGACAGATGGTCTG
Product: ComGD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPAYTHLAVRQKTEQLQKDIQLAQETAIAEHKRTKITFLPKEHKYK LQSGGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKIQLKSAGFTYEITVYLGSGNVHAKRK
Sequences:
>Translated_145_residues MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPAYTHLAVRQKTEQLQKDIQLAQETAIAEHKRTKITFLPKEHKYK LQSGGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKIQLKSAGFTYEITVYLGSGNVHAKRK >Mature_145_residues MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPAYTHLAVRQKTEQLQKDIQLAQETAIAEHKRTKITFLPKEHKYK LQSGGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKIQLKSAGFTYEITVYLGSGNVHAKRK
Specific function: Required for transformation and DNA binding [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein. Cell surface. Note=The unprocessed form is an integral membrane protein. Upon cleavage, it is translocated to the outer face of the membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002416 - InterPro: IPR016785 - InterPro: IPR012902 - InterPro: IPR001120 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16287; Mature: 16287
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPAYTHLAVRQKTEQLQKDIQLAQET CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH AIAEHKRTKITFLPKEHKYKLQSGGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKI HHHHCCCCEEEECCCCCCEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEE QLKSAGFTYEITVYLGSGNVHAKRK EEECCCCEEEEEEEEECCCEECCCC >Mature Secondary Structure MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPAYTHLAVRQKTEQLQKDIQLAQET CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH AIAEHKRTKITFLPKEHKYKLQSGGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKI HHHHCCCCEEEECCCCCCEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEE QLKSAGFTYEITVYLGSGNVHAKRK EEECCCCEEEEEEEEECCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2507524; 8969508; 9384377; 9422590; 9723928 [H]