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The map label for this gene is yqiY [H]

Identifier: 154686658

GI number: 154686658

Start: 2363948

End: 2364607

Strand: Reverse

Name: yqiY [H]

Synonym: RBAM_022270

Alternate gene names: 154686658

Gene position: 2364607-2363948 (Counterclockwise)

Preceding gene: 154686659

Following gene: 154686657

Centisome position: 60.34

GC content: 46.52

Gene sequence:

>660_bases
ATGAATTTGGATTTCTCAGCAACAATCCCCCAAATTCCTTTTATATTGGAAGGCCTTGCGGTCACATTGAAAATTGTGCT
CGTTTCGGCGGTCATCGGTCTTGTATTAGGCATCGTGCTCAGCTTATTTAAAATCAGCACGATCAGTCCGCTGAAATGGA
TTGCGGATTTTTATACTTCGATATTCCGCGGCACGCCGCTCGTGCTGCAGCTGATGATCATCTATTTCGGTATGCCGCAG
CTCCTCGGCTTTCAGATCGATCAATTTTGGGCGGCGGTCACCGCATTATCGCTCAATTCAGCCGCTTACGTCTCTGAAAT
TATCAGAGCGGGAATCAACGCAATTGACAAAGGACAAAAAGAGGCTGCCGTCGCTCTCGGCGTGCCGTACGGAAAAATGA
TGAAAGATCTGCTGCTGCCGCAGGCGTTTAAAAACATTTCTCCGGCTATTATTAACGAATTAATCACCTTAACGAAAGAA
TCGGCGATCGTCACAGTTATCGGTCTTGGCGACATTATGAGACGGGCCTACCAGTCCGGCGCCGCAACATACAACTATTT
AGAACCTCTTATTGTGGCGGGCTTAATCTATTACGTGCTCGTTTTGATCTTAGCATTCATCGGAAAAGGCGTAGAAAGGA
AGCTGAAAGCCAATGATTAA

Upstream 100 bases:

>100_bases
GAAAAACTGAAGAAAAAATGGTTCACCAACGAGAAATAAAAGAAAGCTCAACTTTTCGTTGAGCTTTTTATCTTGAATAA
AGACAAAGGAGATCACACGT

Downstream 100 bases:

>100_bases
GGTCGACAACCTGTCAAAATCATTCGGGAAACATGAAGTACTGAAAAACATTTCAACACAGATCGAAGAAGGGGAAGTCG
TCGCTGTCATCGGCCCTTCC

Product: YqiY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNLDFSATIPQIPFILEGLAVTLKIVLVSAVIGLVLGIVLSLFKISTISPLKWIADFYTSIFRGTPLVLQLMIIYFGMPQ
LLGFQIDQFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALGVPYGKMMKDLLLPQAFKNISPAIINELITLTKE
SAIVTVIGLGDIMRRAYQSGAATYNYLEPLIVAGLIYYVLVLILAFIGKGVERKLKAND

Sequences:

>Translated_219_residues
MNLDFSATIPQIPFILEGLAVTLKIVLVSAVIGLVLGIVLSLFKISTISPLKWIADFYTSIFRGTPLVLQLMIIYFGMPQ
LLGFQIDQFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALGVPYGKMMKDLLLPQAFKNISPAIINELITLTKE
SAIVTVIGLGDIMRRAYQSGAATYNYLEPLIVAGLIYYVLVLILAFIGKGVERKLKAND
>Mature_219_residues
MNLDFSATIPQIPFILEGLAVTLKIVLVSAVIGLVLGIVLSLFKISTISPLKWIADFYTSIFRGTPLVLQLMIIYFGMPQ
LLGFQIDQFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALGVPYGKMMKDLLLPQAFKNISPAIINELITLTKE
SAIVTVIGLGDIMRRAYQSGAATYNYLEPLIVAGLIYYVLVLILAFIGKGVERKLKAND

Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=211, Percent_Identity=37.4407582938389, Blast_Score=157, Evalue=7e-40,
Organism=Escherichia coli, GI1786873, Length=220, Percent_Identity=35, Blast_Score=146, Evalue=9e-37,
Organism=Escherichia coli, GI1787030, Length=221, Percent_Identity=34.3891402714932, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=31.5533980582524, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1787087, Length=217, Percent_Identity=27.1889400921659, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=29.7169811320755, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI87082239, Length=210, Percent_Identity=30, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786874, Length=238, Percent_Identity=27.3109243697479, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788646, Length=199, Percent_Identity=27.6381909547739, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI48994930, Length=120, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23810; Mature: 23810

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDFSATIPQIPFILEGLAVTLKIVLVSAVIGLVLGIVLSLFKISTISPLKWIADFYTS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IFRGTPLVLQLMIIYFGMPQLLGFQIDQFWAAVTALSLNSAAYVSEIIRAGINAIDKGQK
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHH
EAAVALGVPYGKMMKDLLLPQAFKNISPAIINELITLTKESAIVTVIGLGDIMRRAYQSG
HHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHEEEECHHHHHHHHHHCC
AATYNYLEPLIVAGLIYYVLVLILAFIGKGVERKLKAND
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure
MNLDFSATIPQIPFILEGLAVTLKIVLVSAVIGLVLGIVLSLFKISTISPLKWIADFYTS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IFRGTPLVLQLMIIYFGMPQLLGFQIDQFWAAVTALSLNSAAYVSEIIRAGINAIDKGQK
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHH
EAAVALGVPYGKMMKDLLLPQAFKNISPAIINELITLTKESAIVTVIGLGDIMRRAYQSG
HHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHEEEECHHHHHHHHHHCC
AATYNYLEPLIVAGLIYYVLVLILAFIGKGVERKLKAND
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]