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The map label for this gene is yqjB [H]

Identifier: 154686655

GI number: 154686655

Start: 2361603

End: 2362133

Strand: Reverse

Name: yqjB [H]

Synonym: RBAM_022240

Alternate gene names: 154686655

Gene position: 2362133-2361603 (Counterclockwise)

Preceding gene: 154686656

Following gene: 154686654

Centisome position: 60.28

GC content: 49.53

Gene sequence:

>531_bases
ATGCGATTTTTTTTATTGTCAGCCGCCCTGCTGATGTCTCCGCTTTGGCCGCTTGGCGCAAACCCTTTGCCGGGTGACCC
TTATATTATCGTCAATAAAGCCACAAATGCGCTTGCTGTTGTGAAGGATAACCGAATACAAGGCATTTATCAGGTGGCGA
CGGGAAAAACGGATGATTTGACGCCTGAAGGAGAATTTACGGTAACGGTCAAAGCCGTCAATCCGTATTACCGGAAGAAA
AATGTAGAGGGAGGCGCGCCGGAAAACCCGCTCGGCGTCCGCTGGATCGGCTTTGACGCGAAAGGAACCGACGGCAGGAT
ATACGGCATTCACGGAACAAACAGAGAAGAGCTGATCGGGGGGTTTGTGTCAAACGGCTGCATCCGTATGAAAAACCGGG
ATGTCATCCGTATTTTCCGGATTATCCCTCCCGGAACGAAAGTATTGATTACAAAAGAAAACCGCTCATTCGAGGACATT
GCAATAGAGCGGAAAGCCCTCATAAAAAAGCAGGAAACCCCCTTGCAATGA

Upstream 100 bases:

>100_bases
TAAAAGTTATTTCAAAGGCATCAAGCTGTAAAAAACATATGGATCAATCGCATGAGTCCTCCTTTCATTGGTCATTCTAA
TGAAAAAAGGAGGGGAGCCC

Downstream 100 bases:

>100_bases
GGCGCCTGCTTTTTTACCGCAAATACATCATAATGCCTGAGAGGAGGGTTGAAAGTATAAATACGCCCAAAATGACGATG
ACGGCGCTTTTCATAAATTT

Product: YqjB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRFFLLSAALLMSPLWPLGANPLPGDPYIIVNKATNALAVVKDNRIQGIYQVATGKTDDLTPEGEFTVTVKAVNPYYRKK
NVEGGAPENPLGVRWIGFDAKGTDGRIYGIHGTNREELIGGFVSNGCIRMKNRDVIRIFRIIPPGTKVLITKENRSFEDI
AIERKALIKKQETPLQ

Sequences:

>Translated_176_residues
MRFFLLSAALLMSPLWPLGANPLPGDPYIIVNKATNALAVVKDNRIQGIYQVATGKTDDLTPEGEFTVTVKAVNPYYRKK
NVEGGAPENPLGVRWIGFDAKGTDGRIYGIHGTNREELIGGFVSNGCIRMKNRDVIRIFRIIPPGTKVLITKENRSFEDI
AIERKALIKKQETPLQ
>Mature_176_residues
MRFFLLSAALLMSPLWPLGANPLPGDPYIIVNKATNALAVVKDNRIQGIYQVATGKTDDLTPEGEFTVTVKAVNPYYRKK
NVEGGAPENPLGVRWIGFDAKGTDGRIYGIHGTNREELIGGFVSNGCIRMKNRDVIRIFRIIPPGTKVLITKENRSFEDI
AIERKALIKKQETPLQ

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 19537; Mature: 19537

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFFLLSAALLMSPLWPLGANPLPGDPYIIVNKATNALAVVKDNRIQGIYQVATGKTDDL
CEEHEEEHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCC
TPEGEFTVTVKAVNPYYRKKNVEGGAPENPLGVRWIGFDAKGTDGRIYGIHGTNREELIG
CCCCCEEEEEEECCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHH
GFVSNGCIRMKNRDVIRIFRIIPPGTKVLITKENRSFEDIAIERKALIKKQETPLQ
HHHCCCEEEECCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRFFLLSAALLMSPLWPLGANPLPGDPYIIVNKATNALAVVKDNRIQGIYQVATGKTDDL
CEEHEEEHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCC
TPEGEFTVTVKAVNPYYRKKNVEGGAPENPLGVRWIGFDAKGTDGRIYGIHGTNREELIG
CCCCCEEEEEEECCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHH
GFVSNGCIRMKNRDVIRIFRIIPPGTKVLITKENRSFEDIAIERKALIKKQETPLQ
HHHCCCEEEECCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]