Click here to switch to the map view.

The map label for this gene is yqjC [H]

Identifier: 154686654

GI number: 154686654

Start: 2360972

End: 2361400

Strand: Reverse

Name: yqjC [H]

Synonym: RBAM_022230

Alternate gene names: 154686654

Gene position: 2361400-2360972 (Counterclockwise)

Preceding gene: 154686655

Following gene: 154686653

Centisome position: 60.26

GC content: 48.48

Gene sequence:

>429_bases
ATGAAAAAACTTGATCATGTCGGCATTGCCGTCAGCTCTATTGAAGCTGCGAGAGGATTTTACGAACGGATGCTCGGGCT
TACGTATATGGGAGACGAGCTAGTAAGCGGCCAAAATGTGAGAGTTGCTTTTTTAGAAGCGGGAGGCACAAAGCTTGAGC
TGATTGAGCCGCTGTCGGACGCGTCTCCCGTCAGCTCTTTTTTACAGATAAGAGGTGAAGGACTGCATCATTTGGCATTC
CGCTGCGCCGATATGAAGGAAACGATCAAGGAGCTTGAAGCATGCCGCATGACTTTGATCCATCATGAACCGCAAAACGG
AGCGGGCGGGAAGAAGATCGCATTTCTCTCTCCAAAAGAGGCGAACGGGGTCCTGATTGAGCTTTGTGAAACAATTGAAA
AAGGAGAAACTCAAGATGAGCATGAGTGA

Upstream 100 bases:

>100_bases
GAGACATTGTTTCACTCCTTAAGATTACTGTCTATCATTTTAACGTGTTTTGCTTGTATGAACAAGCCATATCCTATGGC
GGAAAGCAGGTGGCCGCGCT

Downstream 100 bases:

>100_bases
TCATATCAGACACTTAAACGAAAGACGTTCCTTTTTAACAAACGGCGGCGGAGCGGAAAAAAATGAAAAACAGCACAAAA
AAGGCAAGCTGACGGCAAGA

Product: YqjC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKKLDHVGIAVSSIEAARGFYERMLGLTYMGDELVSGQNVRVAFLEAGGTKLELIEPLSDASPVSSFLQIRGEGLHHLAF
RCADMKETIKELEACRMTLIHHEPQNGAGGKKIAFLSPKEANGVLIELCETIEKGETQDEHE

Sequences:

>Translated_142_residues
MKKLDHVGIAVSSIEAARGFYERMLGLTYMGDELVSGQNVRVAFLEAGGTKLELIEPLSDASPVSSFLQIRGEGLHHLAF
RCADMKETIKELEACRMTLIHHEPQNGAGGKKIAFLSPKEANGVLIELCETIEKGETQDEHE
>Mature_142_residues
MKKLDHVGIAVSSIEAARGFYERMLGLTYMGDELVSGQNVRVAFLEAGGTKLELIEPLSDASPVSSFLQIRGEGLHHLAF
RCADMKETIKELEACRMTLIHHEPQNGAGGKKIAFLSPKEANGVLIELCETIEKGETQDEHE

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=127, Percent_Identity=35.4330708661417, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17506387, Length=129, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 15580; Mature: 15580

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00934 GLYOXALASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLDHVGIAVSSIEAARGFYERMLGLTYMGDELVSGQNVRVAFLEAGGTKLELIEPLSD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCCEEEEECCCCC
ASPVSSFLQIRGEGLHHLAFRCADMKETIKELEACRMTLIHHEPQNGAGGKKIAFLSPKE
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCC
ANGVLIELCETIEKGETQDEHE
CCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKLDHVGIAVSSIEAARGFYERMLGLTYMGDELVSGQNVRVAFLEAGGTKLELIEPLSD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCCEEEEECCCCC
ASPVSSFLQIRGEGLHHLAFRCADMKETIKELEACRMTLIHHEPQNGAGGKKIAFLSPKE
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCC
ANGVLIELCETIEKGETQDEHE
CCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]