| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is dfnK [H]
Identifier: 154686627
GI number: 154686627
Start: 2278854
End: 2280008
Strand: Reverse
Name: dfnK [H]
Synonym: RBAM_021960
Alternate gene names: 154686627
Gene position: 2280008-2278854 (Counterclockwise)
Preceding gene: 154686628
Following gene: 154686626
Centisome position: 58.18
GC content: 46.41
Gene sequence:
>1155_bases ATGACCAGTTTAACAAAAATCAGACAGCAGCAGCCGTACAAGTGGTACCAAACGATGAGAGAAACCTCTCCCGTTCATTA CAATGAAAAGGAAGATTGCTGGGAAATCTTCACCTATGATGAAGTGAAGCGGGTGATTTCTGACTACAGTCATTTTTCTT CCGATCATAAATACTTAAGTGCGGACAAACAGGAAAAAATGATCCGGCATATTAACAAAGACAGCCTTTTGAAAATGGAC CCGCCCGAACACACCGTCTTCAGAAAATTGGTCAATCAGCCGTTCATGCCGAAATCGGTTGAGTCTCTTGAACCGCGTAT AGCCGCTATCGCTGATGACCTGCTTCAGGCCGTCCGTTCAAAAGGCAGGATGGACATTATTGAAGATTACGCATTTCCGC TTCCGATTATCGTGATCGCAGAGCTTTTAGGATTCCCTCCGAAAGACAGAGATATCTTTAAAAGCTGGGTCGACCAAAGC CAGAATGTAAAAGATGAAAAGAAAATGAATGAAGTGCAAAAGCAGATGATCGGATACTTCATGCAGTTTATTTTACAGCG GAGAAAACAGCCGCAAAATGATTTAATCAGCCATTTAATTTCAGCTGATTTAGACGGAGAGCCGCTGTCAGACAAGCAAT TAATCGGTTTTTGCGGCTTGTTGATCGTCGCGGGGCACGTAACGACGGAAAATGTGATCGGAAATTCATTTCTCAGTCTC AAGGAGTTCCCGCACATTCTGCCCCGGCTGCTTGAAAACAAGGCGCTCCTTCCTGACTTTATTGAGGAAGTCATCCGCCT CAGACCTTCCATTCAGCGGGTAACCCGCTACACTGCGGTTGAGAGCGAGATTGGCGGAAAAACGATTCCGGCCGGAGAAA AAGTGTATGCGTGGATTGGATCGGCGAACAGAGATGAAAAGAAGTTTGAAAATGCCGATCAGATTGACTTGGGACGAAAG CCGAATCAGCATCTGTCATTCGGTCAGGGCAGCCATTATTGTTTAGGAGCGCCGCTGGCCCGGCTTGAAGCGAAAATCGC GCTTTCCCACTTTTTTGAACAGATGTCCGCATGGCGTTTTACTGAGGATCAAGAGCCGAATCTGGTTCCGAGCCCTGTAT TTCACGGCGTTGACAGGCTGCTTGTTGAGTTTTGA
Upstream 100 bases:
>100_bases CGCCAAAACAAGACCGTAATTTCACATATCCGCCCGCCGGGTTTACTCGTAAGCTTTGGCGGGTCATTTCAAATCTTGAT CACATCTTGGAGGAATGAAA
Downstream 100 bases:
>100_bases ACGGAAAAATAAAAGAGGCTTCCACAGGAAGCCTCTTTACTCTGGGGGCTTGGAGAAATGAATGTAGGAATCGAAGCAAT GAACGTGTTTGGCGGAACCG
Product: DfnK
Products: NA
Alternate protein names: ORF405 [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTSLTKIRQQQPYKWYQTMRETSPVHYNEKEDCWEIFTYDEVKRVISDYSHFSSDHKYLSADKQEKMIRHINKDSLLKMD PPEHTVFRKLVNQPFMPKSVESLEPRIAAIADDLLQAVRSKGRMDIIEDYAFPLPIIVIAELLGFPPKDRDIFKSWVDQS QNVKDEKKMNEVQKQMIGYFMQFILQRRKQPQNDLISHLISADLDGEPLSDKQLIGFCGLLIVAGHVTTENVIGNSFLSL KEFPHILPRLLENKALLPDFIEEVIRLRPSIQRVTRYTAVESEIGGKTIPAGEKVYAWIGSANRDEKKFENADQIDLGRK PNQHLSFGQGSHYCLGAPLARLEAKIALSHFFEQMSAWRFTEDQEPNLVPSPVFHGVDRLLVEF
Sequences:
>Translated_384_residues MTSLTKIRQQQPYKWYQTMRETSPVHYNEKEDCWEIFTYDEVKRVISDYSHFSSDHKYLSADKQEKMIRHINKDSLLKMD PPEHTVFRKLVNQPFMPKSVESLEPRIAAIADDLLQAVRSKGRMDIIEDYAFPLPIIVIAELLGFPPKDRDIFKSWVDQS QNVKDEKKMNEVQKQMIGYFMQFILQRRKQPQNDLISHLISADLDGEPLSDKQLIGFCGLLIVAGHVTTENVIGNSFLSL KEFPHILPRLLENKALLPDFIEEVIRLRPSIQRVTRYTAVESEIGGKTIPAGEKVYAWIGSANRDEKKFENADQIDLGRK PNQHLSFGQGSHYCLGAPLARLEAKIALSHFFEQMSAWRFTEDQEPNLVPSPVFHGVDRLLVEF >Mature_383_residues TSLTKIRQQQPYKWYQTMRETSPVHYNEKEDCWEIFTYDEVKRVISDYSHFSSDHKYLSADKQEKMIRHINKDSLLKMDP PEHTVFRKLVNQPFMPKSVESLEPRIAAIADDLLQAVRSKGRMDIIEDYAFPLPIIVIAELLGFPPKDRDIFKSWVDQSQ NVKDEKKMNEVQKQMIGYFMQFILQRRKQPQNDLISHLISADLDGEPLSDKQLIGFCGLLIVAGHVTTENVIGNSFLSLK EFPHILPRLLENKALLPDFIEEVIRLRPSIQRVTRYTAVESEIGGKTIPAGEKVYAWIGSANRDEKKFENADQIDLGRKP NQHLSFGQGSHYCLGAPLARLEAKIALSHFFEQMSAWRFTEDQEPNLVPSPVFHGVDRLLVEF
Specific function: Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Drosophila melanogaster, GI17933518, Length=200, Percent_Identity=26, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44386; Mature: 44255
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLTKIRQQQPYKWYQTMRETSPVHYNEKEDCWEIFTYDEVKRVISDYSHFSSDHKYLS CCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC ADKQEKMIRHINKDSLLKMDPPEHTVFRKLVNQPFMPKSVESLEPRIAAIADDLLQAVRS CHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KGRMDIIEDYAFPLPIIVIAELLGFPPKDRDIFKSWVDQSQNVKDEKKMNEVQKQMIGYF CCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH MQFILQRRKQPQNDLISHLISADLDGEPLSDKQLIGFCGLLIVAGHVTTENVIGNSFLSL HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KEFPHILPRLLENKALLPDFIEEVIRLRPSIQRVTRYTAVESEIGGKTIPAGEKVYAWIG HHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC SANRDEKKFENADQIDLGRKPNQHLSFGQGSHYCLGAPLARLEAKIALSHFFEQMSAWRF CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC TEDQEPNLVPSPVFHGVDRLLVEF CCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TSLTKIRQQQPYKWYQTMRETSPVHYNEKEDCWEIFTYDEVKRVISDYSHFSSDHKYLS CCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC ADKQEKMIRHINKDSLLKMDPPEHTVFRKLVNQPFMPKSVESLEPRIAAIADDLLQAVRS CHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KGRMDIIEDYAFPLPIIVIAELLGFPPKDRDIFKSWVDQSQNVKDEKKMNEVQKQMIGYF CCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH MQFILQRRKQPQNDLISHLISADLDGEPLSDKQLIGFCGLLIVAGHVTTENVIGNSFLSL HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KEFPHILPRLLENKALLPDFIEEVIRLRPSIQRVTRYTAVESEIGGKTIPAGEKVYAWIG HHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC SANRDEKKFENADQIDLGRKPNQHLSFGQGSHYCLGAPLARLEAKIALSHFFEQMSAWRF CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC TEDQEPNLVPSPVFHGVDRLLVEF CCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849493 [H]