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The map label for this gene is ypaA [H]

Identifier: 154686551

GI number: 154686551

Start: 2215485

End: 2216057

Strand: Reverse

Name: ypaA [H]

Synonym: RBAM_021200

Alternate gene names: 154686551

Gene position: 2216057-2215485 (Counterclockwise)

Preceding gene: 154686552

Following gene: 154686549

Centisome position: 56.55

GC content: 45.72

Gene sequence:

>573_bases
GTGAAAGTAAAAAAATTAGTTGTCATCAGTATGCTTAGCAGTATTGCTTTTGTGCTTATGCTGTTAAATTTCCCGTTTCC
GGGGCTGCCGGATTACTTGAAAATTGATTTCAGTGACGTTCCTGCAATTATCGCCATTTTGGTTTACGGGCCTGCGGCGG
GGGTTGCGGTTGAAGCGATTAAAAATATTCTGCAGTATATCATTCAAGGAAGCATGGCCGGCGTGCCTGTCGGGCAGGCA
GCCAATTTTATCGCGGGAACGCTGTTTATTCTGCCGACGGCGTTTATGTTTAAAAAGCTCAATTCGGCAAAAGGGCTTGC
AGTGAGCCTGCTGGCCGGAACCGCGGCGATGACCGTGCTGATGAGTATTTTGAACTATATTCTTATCCTGCCCGCGTATA
CTTGGTTTTTACATTCACCGGCACTGTCAAACAGCCAGTTAAAAACGGCGGTTGTCGCAGGAATCCTGCCGTTTAACATT
GTAAAAGGCGTTATCATCACCATCGTCTTTACGTTCATCTTTACGAAGCTGAAACCTTGGATTGAACAAAAACGCAGCAT
CCAGACACAATAA

Upstream 100 bases:

>100_bases
CTTAGTAAGCTCCCGCTTTTTAACAAAAGCGGTTTTTTTATTGGGGCGCAAAAGAACCTTTCCTCTTTTCGAGAGATTTG
ATCGAAAAGGAGAGAGCATT

Downstream 100 bases:

>100_bases
CCACTTCAAAGCGCCCGCTCTGTAAAACACAGACCGGGCGCTTTTTTGATTGTTTGATCACGCAAAAAATAAGACTCCGG
CCGATAACAGCCGGAGTCTT

Product: YpaA

Products: NA

Alternate protein names: FMN permease [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKVKKLVVISMLSSIAFVLMLLNFPFPGLPDYLKIDFSDVPAIIAILVYGPAAGVAVEAIKNILQYIIQGSMAGVPVGQA
ANFIAGTLFILPTAFMFKKLNSAKGLAVSLLAGTAAMTVLMSILNYILILPAYTWFLHSPALSNSQLKTAVVAGILPFNI
VKGVIITIVFTFIFTKLKPWIEQKRSIQTQ

Sequences:

>Translated_190_residues
MKVKKLVVISMLSSIAFVLMLLNFPFPGLPDYLKIDFSDVPAIIAILVYGPAAGVAVEAIKNILQYIIQGSMAGVPVGQA
ANFIAGTLFILPTAFMFKKLNSAKGLAVSLLAGTAAMTVLMSILNYILILPAYTWFLHSPALSNSQLKTAVVAGILPFNI
VKGVIITIVFTFIFTKLKPWIEQKRSIQTQ
>Mature_190_residues
MKVKKLVVISMLSSIAFVLMLLNFPFPGLPDYLKIDFSDVPAIIAILVYGPAAGVAVEAIKNILQYIIQGSMAGVPVGQA
ANFIAGTLFILPTAFMFKKLNSAKGLAVSLLAGTAAMTVLMSILNYILILPAYTWFLHSPALSNSQLKTAVVAGILPFNI
VKGVIITIVFTFIFTKLKPWIEQKRSIQTQ

Specific function: Mediates riboflavin uptake, probably via a proton- symport mechanism. Can also transport roseoflavin [H]

COG id: COG3601

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic riboflavin transporter (P- RFT) (TC 2.A.87) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009825 [H]

Pfam domain/function: PF07155 DUF1393 [H]

EC number: NA

Molecular weight: Translated: 20545; Mature: 20545

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKKLVVISMLSSIAFVLMLLNFPFPGLPDYLKIDFSDVPAIIAILVYGPAAGVAVEAI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHH
KNILQYIIQGSMAGVPVGQAANFIAGTLFILPTAFMFKKLNSAKGLAVSLLAGTAAMTVL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
MSILNYILILPAYTWFLHSPALSNSQLKTAVVAGILPFNIVKGVIITIVFTFIFTKLKPW
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEQKRSIQTQ
HHHHHCCCCC
>Mature Secondary Structure
MKVKKLVVISMLSSIAFVLMLLNFPFPGLPDYLKIDFSDVPAIIAILVYGPAAGVAVEAI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHH
KNILQYIIQGSMAGVPVGQAANFIAGTLFILPTAFMFKKLNSAKGLAVSLLAGTAAMTVL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
MSILNYILILPAYTWFLHSPALSNSQLKTAVVAGILPFNIVKGVIITIVFTFIFTKLKPW
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEQKRSIQTQ
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]