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The map label for this gene is yppD [H]

Identifier: 154686475

GI number: 154686475

Start: 2144513

End: 2144758

Strand: Reverse

Name: yppD [H]

Synonym: RBAM_020430

Alternate gene names: 154686475

Gene position: 2144758-2144513 (Counterclockwise)

Preceding gene: 154686477

Following gene: 154686474

Centisome position: 54.73

GC content: 48.78

Gene sequence:

>246_bases
ATGTCTGTTTACACGAGCAAGGCTGATATTCTCCGTCTGCTTTCTGATATCGAATTCCGGATTTCTGCTGCTGAAAAGAC
GCTTACCCAAGCAGTCAGATCCTGTCAGGCGGAAGCTGAAGAAATCAGACAGGAGAAACTTTCCCGCCTTGAGGAAGAGG
CGCGGGAGCTTCATGTTTGTATTGATGACCTGTTTTTGACTGACCGACGTAAAAAGGATTTGCCGAGAGCCTGCCGGATC
AGCTGA

Upstream 100 bases:

>100_bases
TTGCCGAACTGCTTCTAGTTTTGTCATGTGCAAAGGAGAGCGGTATGAAAACGAGAATTATATTCTAAAGAAACGCAAGT
GATAAAAGGGAGGAACATGA

Downstream 100 bases:

>100_bases
TTTTATGCAAAAACTTTGGTACCATATGTACTGAGGTGAGTCCGTTTGCAGACACAGTCGTTATTGGAGCTGACAGAACA
AATGATAGAGGCGGTTCTGG

Product: YppD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSVYTSKADILRLLSDIEFRISAAEKTLTQAVRSCQAEAEEIRQEKLSRLEEEARELHVCIDDLFLTDRRKKDLPRACRI
S

Sequences:

>Translated_81_residues
MSVYTSKADILRLLSDIEFRISAAEKTLTQAVRSCQAEAEEIRQEKLSRLEEEARELHVCIDDLFLTDRRKKDLPRACRI
S
>Mature_80_residues
SVYTSKADILRLLSDIEFRISAAEKTLTQAVRSCQAEAEEIRQEKLSRLEEEARELHVCIDDLFLTDRRKKDLPRACRIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020252
- ProDom:   PD059812 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9410; Mature: 9279

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVYTSKADILRLLSDIEFRISAAEKTLTQAVRSCQAEAEEIRQEKLSRLEEEARELHVC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDDLFLTDRRKKDLPRACRIS
HHHHHHHCCHHHCCCCCCCCC
>Mature Secondary Structure 
SVYTSKADILRLLSDIEFRISAAEKTLTQAVRSCQAEAEEIRQEKLSRLEEEARELHVC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDDLFLTDRRKKDLPRACRIS
HHHHHHHCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]