Click here to switch to the map view.

The map label for this gene is yoqH [H]

Identifier: 154686404

GI number: 154686404

Start: 2080816

End: 2081268

Strand: Reverse

Name: yoqH [H]

Synonym: RBAM_019720

Alternate gene names: 154686404

Gene position: 2081268-2080816 (Counterclockwise)

Preceding gene: 154686406

Following gene: 154686403

Centisome position: 53.11

GC content: 42.6

Gene sequence:

>453_bases
ATGAAACGATTTATCTTGGTTATACCGTTATTGTCTGCTGTTATTGCCTCTCCAACTCAAATGAAAGCAAGTCCAATGCC
TTGTAGTGCAGTACTCGAACCGGTGAATCAAAAACTGAAAAATGCGAAGGGTGCGGCACTAATCTATAAAGTGCAGTTAT
ACCCGCCAAGTGCTGCAAGAACGAATATGAGTATTCTTGCTGTCCACCTTCCTCAGCCATCTTCTTATGGAAGCTACGAC
GGTTATGAAGGATTTGCCTCCAAAACAGGAGAGGTCAGTTGGCGATTTAAACTATATCCGACTCCCGAGGAAGAGAGCCC
TAATTGGGCTGGAAGGGTTGATTCCATATCAGCTGAAATGACAAATGTTAAAGTGCAAGTGCGCCTTTCAAATTCTAAGA
CGCAAAAGTTGGGGCCAAGTGTATTAACAAACAATGTTCAATCTTGCTATTAG

Upstream 100 bases:

>100_bases
CCATTCATCTAATGTTCCTGAGAAAACTTGTTGAAAGCTAACCATTCAAAAGTGATGAATATTCAAGGCGGGAGTAAGGG
AAATTAACAAAAAAACTTAG

Downstream 100 bases:

>100_bases
AAATGTAGAGCTCTTATCAAAGAGAGCAATGCGACTGGATCTTTTGTAAATTGTCAAAAAGGTAATTGATCGAGAAATTC
TGGTGAAAAATGAAGAAGAG

Product: YoqH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKRFILVIPLLSAVIASPTQMKASPMPCSAVLEPVNQKLKNAKGAALIYKVQLYPPSAARTNMSILAVHLPQPSSYGSYD
GYEGFASKTGEVSWRFKLYPTPEEESPNWAGRVDSISAEMTNVKVQVRLSNSKTQKLGPSVLTNNVQSCY

Sequences:

>Translated_150_residues
MKRFILVIPLLSAVIASPTQMKASPMPCSAVLEPVNQKLKNAKGAALIYKVQLYPPSAARTNMSILAVHLPQPSSYGSYD
GYEGFASKTGEVSWRFKLYPTPEEESPNWAGRVDSISAEMTNVKVQVRLSNSKTQKLGPSVLTNNVQSCY
>Mature_150_residues
MKRFILVIPLLSAVIASPTQMKASPMPCSAVLEPVNQKLKNAKGAALIYKVQLYPPSAARTNMSILAVHLPQPSSYGSYD
GYEGFASKTGEVSWRFKLYPTPEEESPNWAGRVDSISAEMTNVKVQVRLSNSKTQKLGPSVLTNNVQSCY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16408; Mature: 16408

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFILVIPLLSAVIASPTQMKASPMPCSAVLEPVNQKLKNAKGAALIYKVQLYPPSAAR
CCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCC
TNMSILAVHLPQPSSYGSYDGYEGFASKTGEVSWRFKLYPTPEEESPNWAGRVDSISAEM
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEE
TNVKVQVRLSNSKTQKLGPSVLTNNVQSCY
EEEEEEEEECCCCCCCCCHHHHHCCHHHCC
>Mature Secondary Structure
MKRFILVIPLLSAVIASPTQMKASPMPCSAVLEPVNQKLKNAKGAALIYKVQLYPPSAAR
CCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCC
TNMSILAVHLPQPSSYGSYDGYEGFASKTGEVSWRFKLYPTPEEESPNWAGRVDSISAEM
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEE
TNVKVQVRLSNSKTQKLGPSVLTNNVQSCY
EEEEEEEEECCCCCCCCCHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]