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The map label for this gene is yojE [H]

Identifier: 154686357

GI number: 154686357

Start: 2045658

End: 2046554

Strand: Reverse

Name: yojE [H]

Synonym: RBAM_019250

Alternate gene names: 154686357

Gene position: 2046554-2045658 (Counterclockwise)

Preceding gene: 154686359

Following gene: 154686356

Centisome position: 52.23

GC content: 46.93

Gene sequence:

>897_bases
GTGCAAGGGAATAACGCAAGAAAAGGAATCATTTATACCGCTTGTTCTTTCGCCATGTGGGGGCTGTTTCCGGTCTACTG
GAAACTTCTTGAACAAATACCCGCATTGGACATTTTAGCTCACCGGATTTTATGGTCATTTGTTTTCATGTGTGTGCTTT
TAACTGTGCTTAAGAAGTGGAAAACCGGATGGCGTGAACTGCGTCTTTTGAAATCGGAAGGGGGCCTGCTGGCGCTTTTT
TTCGCTTCCGTTTTAATTTCCGTTAATTGGTTTGTGTACATATGGGCCGTCAATCACGGCTTTTTGCTTGAAGCAAGTCT
CGGGTACTACATTAATCCGCTCGTTTCCGTTCTTTTGGGCATCCTATTCTTAAAAGAAAAGCTTAACAAGATGCAAACAG
CAGCCGTTTCTATTGCCGGGGCGGCCGTGATCATATCTGCGTTTCAATATGGCGCGGTTCCTTATATCGCATTGCTGCTT
GCATTCAGCTTCGGCCTGTACGGCTTATGTAAAAAAAGAACCCGCATGTCCAGCACGATCGGACTGACGCTGGAGACGCT
TTTGATTACCCCGGCTGCACTTATTTATTTAGGATATACAGCTGACGGGAGCACTTCCGGGTCCTTGGGGGCAGGAACAT
GGGCGCTCCTATTTTTCGCAGGCGTATTTACGGCCCTGCCGCTGTTGCTGTTTGCAGAGGGGGCAAAGCGTCTGCCGCTG
TATCAAGTCGGCATTTTGCAATATATAGCGCCGACCATTACCCTTATGCTCGGCGTATTTGTGTATCATGAACCGTTTTC
CGGGCAAAAAGCGTTTACCTTCATTTGTATATGGGCAGCATTGCTTTTGTTTACCTTTTCACAGATAAAATGGAAGCGGC
CGATAAAAAGCCGCTAA

Upstream 100 bases:

>100_bases
CACGGCATCTCACCCTTTCTTAACGGACAACATAGTATATGCCCGCCGGAAGCTTCCCGTGATATAATATAATCTGTTTA
CAGAAAGGAAGGGGAAGGCC

Downstream 100 bases:

>100_bases
GCCTTTCGCTTTCCAGCGATAGCTTAAATTATGTATAATCATTACGAGTATGTAAAGGAGCTGTACAATGGGCACTGATA
AAGACATAGCAAAAGCCTAT

Product: YojE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MQGNNARKGIIYTACSFAMWGLFPVYWKLLEQIPALDILAHRILWSFVFMCVLLTVLKKWKTGWRELRLLKSEGGLLALF
FASVLISVNWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILFLKEKLNKMQTAAVSIAGAAVIISAFQYGAVPYIALLL
AFSFGLYGLCKKRTRMSSTIGLTLETLLITPAALIYLGYTADGSTSGSLGAGTWALLFFAGVFTALPLLLFAEGAKRLPL
YQVGILQYIAPTITLMLGVFVYHEPFSGQKAFTFICIWAALLLFTFSQIKWKRPIKSR

Sequences:

>Translated_298_residues
MQGNNARKGIIYTACSFAMWGLFPVYWKLLEQIPALDILAHRILWSFVFMCVLLTVLKKWKTGWRELRLLKSEGGLLALF
FASVLISVNWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILFLKEKLNKMQTAAVSIAGAAVIISAFQYGAVPYIALLL
AFSFGLYGLCKKRTRMSSTIGLTLETLLITPAALIYLGYTADGSTSGSLGAGTWALLFFAGVFTALPLLLFAEGAKRLPL
YQVGILQYIAPTITLMLGVFVYHEPFSGQKAFTFICIWAALLLFTFSQIKWKRPIKSR
>Mature_298_residues
MQGNNARKGIIYTACSFAMWGLFPVYWKLLEQIPALDILAHRILWSFVFMCVLLTVLKKWKTGWRELRLLKSEGGLLALF
FASVLISVNWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILFLKEKLNKMQTAAVSIAGAAVIISAFQYGAVPYIALLL
AFSFGLYGLCKKRTRMSSTIGLTLETLLITPAALIYLGYTADGSTSGSLGAGTWALLFFAGVFTALPLLLFAEGAKRLPL
YQVGILQYIAPTITLMLGVFVYHEPFSGQKAFTFICIWAALLLFTFSQIKWKRPIKSR

Specific function: Unknown

COG id: COG2962

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI48994976, Length=298, Percent_Identity=40.6040268456376, Blast_Score=218, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR004626 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33169; Mature: 33169

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGNNARKGIIYTACSFAMWGLFPVYWKLLEQIPALDILAHRILWSFVFMCVLLTVLKKW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KTGWRELRLLKSEGGLLALFFASVLISVNWFVYIWAVNHGFLLEASLGYYINPLVSVLLG
HCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCHHHHHHHHHHHH
ILFLKEKLNKMQTAAVSIAGAAVIISAFQYGAVPYIALLLAFSFGLYGLCKKRTRMSSTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLTLETLLITPAALIYLGYTADGSTSGSLGAGTWALLFFAGVFTALPLLLFAEGAKRLPL
HHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
YQVGILQYIAPTITLMLGVFVYHEPFSGQKAFTFICIWAALLLFTFSQIKWKRPIKSR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQGNNARKGIIYTACSFAMWGLFPVYWKLLEQIPALDILAHRILWSFVFMCVLLTVLKKW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KTGWRELRLLKSEGGLLALFFASVLISVNWFVYIWAVNHGFLLEASLGYYINPLVSVLLG
HCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCHHHHHHHHHHHH
ILFLKEKLNKMQTAAVSIAGAAVIISAFQYGAVPYIALLLAFSFGLYGLCKKRTRMSSTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLTLETLLITPAALIYLGYTADGSTSGSLGAGTWALLFFAGVFTALPLLLFAEGAKRLPL
HHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
YQVGILQYIAPTITLMLGVFVYHEPFSGQKAFTFICIWAALLLFTFSQIKWKRPIKSR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]