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The map label for this gene is ynfC [H]

Identifier: 154686226

GI number: 154686226

Start: 1848199

End: 1848552

Strand: Reverse

Name: ynfC [H]

Synonym: RBAM_017930

Alternate gene names: 154686226

Gene position: 1848552-1848199 (Counterclockwise)

Preceding gene: 154686242

Following gene: 154686225

Centisome position: 47.17

GC content: 41.81

Gene sequence:

>354_bases
TTGAAAAAAATCTTGTTTTTAAAAGCTTCTATTTTATTTTTAGCGATTGCAAGCTTTCATTTGCTCTCCATTCCCCATGC
GTTTGATACTGCTCATCATTTTAAAGCGGTAGCCGACCAGCAGGAAATGCACGAAATGAAGGCCGGCCAAAATGCTGATG
ATGAGAAAAAATCGCTGACGGGCTCATATATCTTGACGGCGCTTTTTGCCGCTTCTGTCTCACTGATCGTGATATCAGAC
AGGAGACGCCCCGCTTCCCGGAGAAGACAGCGAAAGAAAAGCTTTTTAATCGCTAAATTTTATCAGTCCTCTTATTTCGA
TGAGCTTCATGTTCAACATCGCCTATCTATGTAA

Upstream 100 bases:

>100_bases
CCAGGATAATAATTTTTTAAATTTAATAAATATGTTTACTTTACATTTAAATTAGGGTATTATAATAAAAATATTCAGAC
TTATGAAGGGGGGAGAACAT

Downstream 100 bases:

>100_bases
CATAAAATGAGGAGGTTGTTAAACATGTTGTTTATCTTACGAATGGTGATTTTAGGGTTATTTTCATTCACTGCATTGAA
TTTATTTGTATGGCAGGGAA

Product: YnfC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKKILFLKASILFLAIASFHLLSIPHAFDTAHHFKAVADQQEMHEMKAGQNADDEKKSLTGSYILTALFAASVSLIVISD
RRRPASRRRQRKKSFLIAKFYQSSYFDELHVQHRLSM

Sequences:

>Translated_117_residues
MKKILFLKASILFLAIASFHLLSIPHAFDTAHHFKAVADQQEMHEMKAGQNADDEKKSLTGSYILTALFAASVSLIVISD
RRRPASRRRQRKKSFLIAKFYQSSYFDELHVQHRLSM
>Mature_117_residues
MKKILFLKASILFLAIASFHLLSIPHAFDTAHHFKAVADQQEMHEMKAGQNADDEKKSLTGSYILTALFAASVSLIVISD
RRRPASRRRQRKKSFLIAKFYQSSYFDELHVQHRLSM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13450; Mature: 13450

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILFLKASILFLAIASFHLLSIPHAFDTAHHFKAVADQQEMHEMKAGQNADDEKKSLT
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GSYILTALFAASVSLIVISDRRRPASRRRQRKKSFLIAKFYQSSYFDELHVQHRLSM
HHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKILFLKASILFLAIASFHLLSIPHAFDTAHHFKAVADQQEMHEMKAGQNADDEKKSLT
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GSYILTALFAASVSLIVISDRRRPASRRRQRKKSFLIAKFYQSSYFDELHVQHRLSM
HHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377 [H]