| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
Click here to switch to the map view.
The map label for this gene is yobO [H]
Identifier: 154686192
GI number: 154686192
Start: 1820888
End: 1823305
Strand: Reverse
Name: yobO [H]
Synonym: RBAM_017590
Alternate gene names: 154686192
Gene position: 1823305-1820888 (Counterclockwise)
Preceding gene: 154686196
Following gene: 154686191
Centisome position: 46.53
GC content: 48.55
Gene sequence:
>2418_bases ATGGTTCAATTTAAAAACTTTCCTGATCCGTCTTTAAACGCCCCATTGCAGTCTCGCCCTGCACAGCCCTCTGAATTGGA GCATCTCAAAGCAAGGATGCAGAATTTTATTAAGCATTCCGCAACGGATGATAATCTTGAGATCGCAGATGCCCGGGTGA CGGCGGAAGGAATGGTCACCTCACTTTTAAAAGAACGGCTTGATACAGAATACGAAATGCTTATGAATAAAATCACCCGG GAAGTGAATGTGGAGGACTACGGAGCGATCCCTGACGGCCGGGACAATACGGAAGCCTTTCGGAGAGCGATCGGGAACGG CCGGGTCAAAGTAAATGTTCCCGCAGGAGAATTTTTGGTTCAAGGGATAAAACTCCCCTCATGGACTACCATTTACGGTG AGGGACAAGGGATTACCGTGCTTAAGCTTCATGAGGACACTCCCGCATTCGAATGGGTCATTACTAACGATGATTACGAA AATGGAAACCGTAATATTTTTGTCGAAAACATGACTTTAGACTGGAATCCTGATCGTCAATGCGGGGTCAGGAACCCCGG AGGACAGTTTTCCAGCTGTTTAACGTTTGCTAATGTGCAATACGGCTGGATTAAGAATGTTGAAACGGTTAACGCGGGTC TCCATGGTATTGATATTACATCTCCGACTTACGATCATTTGCCTGAAACAGAATGGACGAAAGACGGCTGCCGATATATA TGGATTGATAACTGTGTGGCATACGGCGCCGGAGACGACGGCATTACCACCCATTACAGCGAGTATATTTTCATCTCCAA CTGCCATTCCGGAAACCCCCGCGGCACAGAGCATGCTGAGGGCAGCGCAAACTCGAACGGCATTGAAATTGACGACGGCT CTAAACATGTATGGCTTTTAAATAACTATACGAGCGGAAATATCCGCGGGATTGAGGTAAAGGCGCACAGCCTGTGGCCG GCTTCTCAAAATGTTCATATTATCGGTCATGTTTCGTATCGTGATGTACGTTCATTTGATATTCGTCATATCGGCCATCA TCAGGCCTCAGACCCCGAAAGCACGACGGCTTATGATGTTACTTTAACCGATTGCACCGCGATTGAACCGGTATTCAATG CTCTCTATGACGGTGTGACCCCGAGGGCGCTGGTCATCTCTGCCTATAAAAACGTTAATGTAAACGGATTCACAGCTATT GGTGATCCCTCATACGACTATGGCGGGAATCCAGTCGTGGCTCTTCAATACCGCAGTCAAAATATCACGATCAACGGCAT TAAAATACGCGGCTTTACACAAGCAGGTGTTGACATCAATATATCCGGCGGATCAAATAAAACCGATTATGTTAAAATTT TAAATTTTGATATATACAAGTCATCTCCTAAAGGCATCTCAATCGGCGGAGGCCAATATAACGTAAATATTATGAACGGT ACGATGATCGGAGACGGCGGTTCCGTCGGAATTACGTCCCCTAACAGTCAGGCCGTCATTCTCGGGGTGCAAGCGGAAGG TTACAGCGCGGCCGCATCTATAAAAGGACAGACTTATGAGCAGATCCCCGTCAATTTAAAGGGAGGCGCACAGCTCGCGA CCAGCTCCGGTTTTGCATTCAACCCGACAAGCGCCGTTATTGCGGGAACAGGCGATATTACGGCCAGAGGTGACAGAAAT GCGATCATCAGCTCTTCCGGAGGTTCAAGTTCTGAAGGTTCAAGGGCATTTATCGCCGCTTCAAACAATGCCCATATTAC GGGCAGCAAAGTCTCCAGAACGATTCTGTCATCAGAAAGCATTACATTGGAAGAACCATACACGGTTGCCGGAGGGCATC AGTCCATCAAATGGAAACTGGATTCAGCGGGCGGCCACGGTACGTTCGCCGGAGCTGTCACCTCTTCCCTGTCAGGGTAC GGAGAATATTTTGAAAGTGTAACCGGCCAGACAATTCCCGCCGGGACGATCGTCACAGTGAAAGGCGAAAAAATTGAATC GGCTCACGTCGGAGATTACATGCTCGGCGTCATTTCAGAAACAGCCGCTTTTATCTCAGGAGCCGCAAGCTTCGGATGGC AAAGCCGCTTTTTGACAAACGAGTTCGGCGGTTTCATATACGAAAATGTGACTGACGAGGAAACAGGAGAAACGGTACGC GTGCCGAAACAAAACCCAGACTGCAGTCCGGCTCTTGAAGCTGACTATGAAGCACGCGCGGCCAGAGACGAATGGCACAT TGTCGGACTCAACGGCCGGCATTACGTACGGGTCGACAGTACGGTCAGCCCGGGAGATTATATCACGGCCCATAACGGAA TCGGGACTAAAGCCGCGGAAGGCTGGAAGGTATTGAAACTGACAGCCTTATACAGTTCTGAAAAAGGGTACGGCATTGCA ATTGCGGTTATCAAATAG
Upstream 100 bases:
>100_bases TCTGAATAAAGAATTTGAAGAATAAGCGCTTAAAGGGCGCGCGACTCTTTTCTGTCCCCTGCCTCAGGCGCTTATATCAA AAGAAAGAGGTGTCTTTAGA
Downstream 100 bases:
>100_bases GGTCTCAATATCAGGATCATCTCCTCTCTTTTCTATCGGGCGGGTATGATCCTGTTTTTTATACCGAATGAGATGCCTCT TTTTCAGCATACCGTTTCAT
Product: YobO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 805; Mature: 805
Protein sequence:
>805_residues MVQFKNFPDPSLNAPLQSRPAQPSELEHLKARMQNFIKHSATDDNLEIADARVTAEGMVTSLLKERLDTEYEMLMNKITR EVNVEDYGAIPDGRDNTEAFRRAIGNGRVKVNVPAGEFLVQGIKLPSWTTIYGEGQGITVLKLHEDTPAFEWVITNDDYE NGNRNIFVENMTLDWNPDRQCGVRNPGGQFSSCLTFANVQYGWIKNVETVNAGLHGIDITSPTYDHLPETEWTKDGCRYI WIDNCVAYGAGDDGITTHYSEYIFISNCHSGNPRGTEHAEGSANSNGIEIDDGSKHVWLLNNYTSGNIRGIEVKAHSLWP ASQNVHIIGHVSYRDVRSFDIRHIGHHQASDPESTTAYDVTLTDCTAIEPVFNALYDGVTPRALVISAYKNVNVNGFTAI GDPSYDYGGNPVVALQYRSQNITINGIKIRGFTQAGVDINISGGSNKTDYVKILNFDIYKSSPKGISIGGGQYNVNIMNG TMIGDGGSVGITSPNSQAVILGVQAEGYSAAASIKGQTYEQIPVNLKGGAQLATSSGFAFNPTSAVIAGTGDITARGDRN AIISSSGGSSSEGSRAFIAASNNAHITGSKVSRTILSSESITLEEPYTVAGGHQSIKWKLDSAGGHGTFAGAVTSSLSGY GEYFESVTGQTIPAGTIVTVKGEKIESAHVGDYMLGVISETAAFISGAASFGWQSRFLTNEFGGFIYENVTDEETGETVR VPKQNPDCSPALEADYEARAARDEWHIVGLNGRHYVRVDSTVSPGDYITAHNGIGTKAAEGWKVLKLTALYSSEKGYGIA IAVIK
Sequences:
>Translated_805_residues MVQFKNFPDPSLNAPLQSRPAQPSELEHLKARMQNFIKHSATDDNLEIADARVTAEGMVTSLLKERLDTEYEMLMNKITR EVNVEDYGAIPDGRDNTEAFRRAIGNGRVKVNVPAGEFLVQGIKLPSWTTIYGEGQGITVLKLHEDTPAFEWVITNDDYE NGNRNIFVENMTLDWNPDRQCGVRNPGGQFSSCLTFANVQYGWIKNVETVNAGLHGIDITSPTYDHLPETEWTKDGCRYI WIDNCVAYGAGDDGITTHYSEYIFISNCHSGNPRGTEHAEGSANSNGIEIDDGSKHVWLLNNYTSGNIRGIEVKAHSLWP ASQNVHIIGHVSYRDVRSFDIRHIGHHQASDPESTTAYDVTLTDCTAIEPVFNALYDGVTPRALVISAYKNVNVNGFTAI GDPSYDYGGNPVVALQYRSQNITINGIKIRGFTQAGVDINISGGSNKTDYVKILNFDIYKSSPKGISIGGGQYNVNIMNG TMIGDGGSVGITSPNSQAVILGVQAEGYSAAASIKGQTYEQIPVNLKGGAQLATSSGFAFNPTSAVIAGTGDITARGDRN AIISSSGGSSSEGSRAFIAASNNAHITGSKVSRTILSSESITLEEPYTVAGGHQSIKWKLDSAGGHGTFAGAVTSSLSGY GEYFESVTGQTIPAGTIVTVKGEKIESAHVGDYMLGVISETAAFISGAASFGWQSRFLTNEFGGFIYENVTDEETGETVR VPKQNPDCSPALEADYEARAARDEWHIVGLNGRHYVRVDSTVSPGDYITAHNGIGTKAAEGWKVLKLTALYSSEKGYGIA IAVIK >Mature_805_residues MVQFKNFPDPSLNAPLQSRPAQPSELEHLKARMQNFIKHSATDDNLEIADARVTAEGMVTSLLKERLDTEYEMLMNKITR EVNVEDYGAIPDGRDNTEAFRRAIGNGRVKVNVPAGEFLVQGIKLPSWTTIYGEGQGITVLKLHEDTPAFEWVITNDDYE NGNRNIFVENMTLDWNPDRQCGVRNPGGQFSSCLTFANVQYGWIKNVETVNAGLHGIDITSPTYDHLPETEWTKDGCRYI WIDNCVAYGAGDDGITTHYSEYIFISNCHSGNPRGTEHAEGSANSNGIEIDDGSKHVWLLNNYTSGNIRGIEVKAHSLWP ASQNVHIIGHVSYRDVRSFDIRHIGHHQASDPESTTAYDVTLTDCTAIEPVFNALYDGVTPRALVISAYKNVNVNGFTAI GDPSYDYGGNPVVALQYRSQNITINGIKIRGFTQAGVDINISGGSNKTDYVKILNFDIYKSSPKGISIGGGQYNVNIMNG TMIGDGGSVGITSPNSQAVILGVQAEGYSAAASIKGQTYEQIPVNLKGGAQLATSSGFAFNPTSAVIAGTGDITARGDRN AIISSSGGSSSEGSRAFIAASNNAHITGSKVSRTILSSESITLEEPYTVAGGHQSIKWKLDSAGGHGTFAGAVTSSLSGY GEYFESVTGQTIPAGTIVTVKGEKIESAHVGDYMLGVISETAAFISGAASFGWQSRFLTNEFGGFIYENVTDEETGETVR VPKQNPDCSPALEADYEARAARDEWHIVGLNGRHYVRVDSTVSPGDYITAHNGIGTKAAEGWKVLKLTALYSSEKGYGIA IAVIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 6 PbH1 repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021865 - InterPro: IPR006626 - InterPro: IPR012334 - InterPro: IPR011050 [H]
Pfam domain/function: PF11962 DUF3476 [H]
EC number: NA
Molecular weight: Translated: 86736; Mature: 86736
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQFKNFPDPSLNAPLQSRPAQPSELEHLKARMQNFIKHSATDDNLEIADARVTAEGMVT CCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHH SLLKERLDTEYEMLMNKITREVNVEDYGAIPDGRDNTEAFRRAIGNGRVKVNVPAGEFLV HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHH QGIKLPSWTTIYGEGQGITVLKLHEDTPAFEWVITNDDYENGNRNIFVENMTLDWNPDRQ CCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCC CGVRNPGGQFSSCLTFANVQYGWIKNVETVNAGLHGIDITSPTYDHLPETEWTKDGCRYI CCCCCCCCCHHHHEEEECCCCCHHCCCEEECCCCEEEECCCCCHHCCCCCCCCCCCCEEE WIDNCVAYGAGDDGITTHYSEYIFISNCHSGNPRGTEHAEGSANSNGIEIDDGSKHVWLL EEECEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEE NNYTSGNIRGIEVKAHSLWPASQNVHIIGHVSYRDVRSFDIRHIGHHQASDPESTTAYDV ECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEE TLTDCTAIEPVFNALYDGVTPRALVISAYKNVNVNGFTAIGDPSYDYGGNPVVALQYRSQ EECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEECC NITINGIKIRGFTQAGVDINISGGSNKTDYVKILNFDIYKSSPKGISIGGGQYNVNIMNG EEEEEEEEEEEEEECCEEEEECCCCCCCCEEEEEEEEEECCCCCEEEECCCEEEEEEEEC TMIGDGGSVGITSPNSQAVILGVQAEGYSAAASIKGQTYEQIPVNLKGGAQLATSSGFAF EEECCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCEEEECCEEECCCCEEEECCCCEE NPTSAVIAGTGDITARGDRNAIISSSGGSSSEGSRAFIAASNNAHITGSKVSRTILSSES CCCCEEEEECCCEEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEECHHHEEEEECCCC ITLEEPYTVAGGHQSIKWKLDSAGGHGTFAGAVTSSLSGYGEYFESVTGQTIPAGTIVTV EEECCCEEEECCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE KGEKIESAHVGDYMLGVISETAAFISGAASFGWQSRFLTNEFGGFIYENVTDEETGETVR ECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCCEEE VPKQNPDCSPALEADYEARAARDEWHIVGLNGRHYVRVDSTVSPGDYITAHNGIGTKAAE CCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCC GWKVLKLTALYSSEKGYGIAIAVIK CEEEEEEEEEECCCCCCEEEEEEEC >Mature Secondary Structure MVQFKNFPDPSLNAPLQSRPAQPSELEHLKARMQNFIKHSATDDNLEIADARVTAEGMVT CCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHH SLLKERLDTEYEMLMNKITREVNVEDYGAIPDGRDNTEAFRRAIGNGRVKVNVPAGEFLV HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHH QGIKLPSWTTIYGEGQGITVLKLHEDTPAFEWVITNDDYENGNRNIFVENMTLDWNPDRQ CCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCC CGVRNPGGQFSSCLTFANVQYGWIKNVETVNAGLHGIDITSPTYDHLPETEWTKDGCRYI CCCCCCCCCHHHHEEEECCCCCHHCCCEEECCCCEEEECCCCCHHCCCCCCCCCCCCEEE WIDNCVAYGAGDDGITTHYSEYIFISNCHSGNPRGTEHAEGSANSNGIEIDDGSKHVWLL EEECEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEE NNYTSGNIRGIEVKAHSLWPASQNVHIIGHVSYRDVRSFDIRHIGHHQASDPESTTAYDV ECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEE TLTDCTAIEPVFNALYDGVTPRALVISAYKNVNVNGFTAIGDPSYDYGGNPVVALQYRSQ EECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEECC NITINGIKIRGFTQAGVDINISGGSNKTDYVKILNFDIYKSSPKGISIGGGQYNVNIMNG EEEEEEEEEEEEEECCEEEEECCCCCCCCEEEEEEEEEECCCCCEEEECCCEEEEEEEEC TMIGDGGSVGITSPNSQAVILGVQAEGYSAAASIKGQTYEQIPVNLKGGAQLATSSGFAF EEECCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCEEEECCEEECCCCEEEECCCCEE NPTSAVIAGTGDITARGDRNAIISSSGGSSSEGSRAFIAASNNAHITGSKVSRTILSSES CCCCEEEEECCCEEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEECHHHEEEEECCCC ITLEEPYTVAGGHQSIKWKLDSAGGHGTFAGAVTSSLSGYGEYFESVTGQTIPAGTIVTV EEECCCEEEECCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE KGEKIESAHVGDYMLGVISETAAFISGAASFGWQSRFLTNEFGGFIYENVTDEETGETVR ECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCCEEE VPKQNPDCSPALEADYEARAARDEWHIVGLNGRHYVRVDSTVSPGDYITAHNGIGTKAAE CCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCC GWKVLKLTALYSSEKGYGIAIAVIK CEEEEEEEEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]