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The map label for this gene is ylbJ [H]

Identifier: 154685922

GI number: 154685922

Start: 1486877

End: 1488103

Strand: Reverse

Name: ylbJ [H]

Synonym: RBAM_014890

Alternate gene names: 154685922

Gene position: 1488103-1486877 (Counterclockwise)

Preceding gene: 154685925

Following gene: 154685913

Centisome position: 37.98

GC content: 48.9

Gene sequence:

>1227_bases
ATGAATTTGTCTAAGTTTCATACATTTTTGATTTCATTGTTTTTCATTTTTTTGACGGCTACGGTTATTTCACACCCTCA
GGCCTCATTCGAAGCCTCCAAAACCGGTCTTTCCATGTGGTGGGAGGTAGTTTTTCCTTCATTGCTTCCGTTTTTTATTC
TATCTGAGCTTTTAATAGGATTCGGCATTGTCAAGTTTGTCGGCCTTTTACTCGAACCCTTTATGCGTCCCATTTTCAGA
GTGCCGGGGGTCGGCGGATTTGTACTGGCTATGGGCATGGCTTCAGGCAATCCGGCCGGCGCGAAGCTGACTGCACGGCT
GCGCCAGGATAAACAAATCTCCAGAGTAGAGGCTGAACGCCTCGTCTCTTTTACCAATTCATCCAATCCGTTATTTATAT
TCGCTGCTGTGGCAGTCGGCTTTTTTCATAACGCGTCTCTCGGCATTCTGCTGGCATCGGCTCACTATCTCGGAAACATC
GCCGTCGGCCTGACGATGCGTTCATACGGACGGAAAGAAGAAGCGGCGTATACCGGTAAAAAGACGATCGCTCTCCCTTC
TCTGAAGGAAGCATTTCTGGCCCTCCACAAGGCGCGGCTTTCGGAAAAGCGGCCGCTCGGAAAAATTTTGGGCGACGCCG
TCACCTCTTCTGTACAAACCTTGCTGATGGTGGGCGGTTTTATTATATTGTTTTCGGTTTTCAGCCGGTTATTATCAATC
GTACAAGTCATGGATGTGCTTTCTGTATTTACAAACGCGCTGCTTTCGCTTTTTCATCTTCCGGCAAATCTGGACATCCC
TCTTATCAGCGGAATGTTTGAAATTACACTTGGGAGCAAGCTGGTCAGTGAAGCTGATGCCGCCTTGCTGCCGAAAGCCA
TGATTGTGAGTTTTATTCTCGGGTTCAGCGGCCTTTCCGTACAGGCCCAGGTAGCCGGCATTTTATCGGAAACAGATATC
CGCTTTAAACCGTTTTTCGCGGCGCGTATCCTTCAGGGCATTTATGCCGCACTCTTTATTCTCTTACTGTGGAAGCCGCT
TTACCTTGCATTGGACGAACCTTACCAGTCCGTATTCCTCCCTTTCCGCGATCAGGAAGCGGTATCTGCTGCCGTCAGCG
GCTGGAATACACTTGTTGAAACCGGGCCCGCCATCACGCTGACAGCTCTCGCCGTATACGCATTGATTTATTGTTACAGG
CTGTCAGCACGGACAAAAAAAGGATGA

Upstream 100 bases:

>100_bases
GGATGACAAATAGGTACTTGCCCGGCCGCCTTTAAGGTCTGTTCTATATTTTATCATGATATAAATGTCAGTGTGCAATT
TTAGCATCGGGGAGGTAAGA

Downstream 100 bases:

>100_bases
GACGCCAATCAGCGCTTCTCATCCTTTAAATTTCTGCATCAGCGCCTGTTCAACTTCCGGAGGAACAAACTCTGAAACAG
GCCCGTTATATTTTGCGACT

Product: YlbJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MNLSKFHTFLISLFFIFLTATVISHPQASFEASKTGLSMWWEVVFPSLLPFFILSELLIGFGIVKFVGLLLEPFMRPIFR
VPGVGGFVLAMGMASGNPAGAKLTARLRQDKQISRVEAERLVSFTNSSNPLFIFAAVAVGFFHNASLGILLASAHYLGNI
AVGLTMRSYGRKEEAAYTGKKTIALPSLKEAFLALHKARLSEKRPLGKILGDAVTSSVQTLLMVGGFIILFSVFSRLLSI
VQVMDVLSVFTNALLSLFHLPANLDIPLISGMFEITLGSKLVSEADAALLPKAMIVSFILGFSGLSVQAQVAGILSETDI
RFKPFFAARILQGIYAALFILLLWKPLYLALDEPYQSVFLPFRDQEAVSAAVSGWNTLVETGPAITLTALAVYALIYCYR
LSARTKKG

Sequences:

>Translated_408_residues
MNLSKFHTFLISLFFIFLTATVISHPQASFEASKTGLSMWWEVVFPSLLPFFILSELLIGFGIVKFVGLLLEPFMRPIFR
VPGVGGFVLAMGMASGNPAGAKLTARLRQDKQISRVEAERLVSFTNSSNPLFIFAAVAVGFFHNASLGILLASAHYLGNI
AVGLTMRSYGRKEEAAYTGKKTIALPSLKEAFLALHKARLSEKRPLGKILGDAVTSSVQTLLMVGGFIILFSVFSRLLSI
VQVMDVLSVFTNALLSLFHLPANLDIPLISGMFEITLGSKLVSEADAALLPKAMIVSFILGFSGLSVQAQVAGILSETDI
RFKPFFAARILQGIYAALFILLLWKPLYLALDEPYQSVFLPFRDQEAVSAAVSGWNTLVETGPAITLTALAVYALIYCYR
LSARTKKG
>Mature_408_residues
MNLSKFHTFLISLFFIFLTATVISHPQASFEASKTGLSMWWEVVFPSLLPFFILSELLIGFGIVKFVGLLLEPFMRPIFR
VPGVGGFVLAMGMASGNPAGAKLTARLRQDKQISRVEAERLVSFTNSSNPLFIFAAVAVGFFHNASLGILLASAHYLGNI
AVGLTMRSYGRKEEAAYTGKKTIALPSLKEAFLALHKARLSEKRPLGKILGDAVTSSVQTLLMVGGFIILFSVFSRLLSI
VQVMDVLSVFTNALLSLFHLPANLDIPLISGMFEITLGSKLVSEADAALLPKAMIVSFILGFSGLSVQAQVAGILSETDI
RFKPFFAARILQGIYAALFILLLWKPLYLALDEPYQSVFLPFRDQEAVSAAVSGWNTLVETGPAITLTALAVYALIYCYR
LSARTKKG

Specific function: Required for spore cortex formation [H]

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642
- InterPro:   IPR014226 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 44432; Mature: 44432

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12662922 [H]