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The map label for this gene is ykwD [H]

Identifier: 154685808

GI number: 154685808

Start: 1337126

End: 1337911

Strand: Reverse

Name: ykwD [H]

Synonym: RBAM_013750

Alternate gene names: 154685808

Gene position: 1337911-1337126 (Counterclockwise)

Preceding gene: 154685811

Following gene: 154685807

Centisome position: 34.14

GC content: 42.37

Gene sequence:

>786_bases
ATGAAAAAAGCATTTCTCTTATCTGCTGCTGCGGCAGTCAGTTTGATTACATTCGGAGGCATTCAGCAGGCATCTGCCAA
AGAGCTGTCATGCCAGCACGTCGTTACCGTAAAAAAAGGAAACACTGTACAGCATCTGACTCTTCAAGAGGCTGTTGAAA
AACTACATATGAGAACGAGCGTGAAACAGCTGAACGTTAAAAATGAGAAAGAACTGACTCAGCTGCTGCAAAAACACGCA
AAGCATTCTGATATGATAGTTAAAGACGTTCAAAAAGAAACACCGGCAAAAACGGCTCCGGCAGCTGCTGAAAAACCGAA
AGCCGATCAAAACCAGCAAAACCAGGCTGCTGACAATGCAAAGCAGACAGATAACACAAACAACAGCAGCGAGAAAACTC
CTTCTTCTGTCAGTGCGTACGAAAAGAAAGTCGTTGAATTGACAAATGCAGAGAGACAAAAGCAAGGTTTAAAACCTCTG
CAGATTGATGATAAACTAAGCAAATCCGCTCACGCAAAATCACAAGATATGAAAGACAAAAACTATTTCGATCACCAAAG
CCCTACTTACGGCTCACCTTTCGATATGATGAAGTCTTTCGGAATCACTTATAAAACTGCTGGTGAAAATATCGCCAAAG
GACAGCCGACTCCTGAAGCTGTCGTTAAAGCTTGGATGAACAGTGAAGGCCACAGAAAGAACATCATGAATCCTGAGTTC
ACTCAAATCGGTGTCGGTTACGTAGAATCAGGAAACATCTGGACACAGCAATTTATCGGAAAATAA

Upstream 100 bases:

>100_bases
AAACGTTTGTTGTCAAAGGAAATGGCTGCCTGCATTATGACAAAAAAGCTGTGATAAGATTTTTCATGTAGAAAAAAACT
TCTCTGGGAGGCTATTAACT

Downstream 100 bases:

>100_bases
ATAATAAAAAAGATTGCCCCTGCGGGCAATCTTTTGCTTGTCGAAAAAGTGACTGAGACGGTGCAAAAAGCGCTCAAAAC
CGGTGAAGCCGGAGGCGGCT

Product: YkwD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKKAFLLSAAAAVSLITFGGIQQASAKELSCQHVVTVKKGNTVQHLTLQEAVEKLHMRTSVKQLNVKNEKELTQLLQKHA
KHSDMIVKDVQKETPAKTAPAAAEKPKADQNQQNQAADNAKQTDNTNNSSEKTPSSVSAYEKKVVELTNAERQKQGLKPL
QIDDKLSKSAHAKSQDMKDKNYFDHQSPTYGSPFDMMKSFGITYKTAGENIAKGQPTPEAVVKAWMNSEGHRKNIMNPEF
TQIGVGYVESGNIWTQQFIGK

Sequences:

>Translated_261_residues
MKKAFLLSAAAAVSLITFGGIQQASAKELSCQHVVTVKKGNTVQHLTLQEAVEKLHMRTSVKQLNVKNEKELTQLLQKHA
KHSDMIVKDVQKETPAKTAPAAAEKPKADQNQQNQAADNAKQTDNTNNSSEKTPSSVSAYEKKVVELTNAERQKQGLKPL
QIDDKLSKSAHAKSQDMKDKNYFDHQSPTYGSPFDMMKSFGITYKTAGENIAKGQPTPEAVVKAWMNSEGHRKNIMNPEF
TQIGVGYVESGNIWTQQFIGK
>Mature_261_residues
MKKAFLLSAAAAVSLITFGGIQQASAKELSCQHVVTVKKGNTVQHLTLQEAVEKLHMRTSVKQLNVKNEKELTQLLQKHA
KHSDMIVKDVQKETPAKTAPAAAEKPKADQNQQNQAADNAKQTDNTNNSSEKTPSSVSAYEKKVVELTNAERQKQGLKPL
QIDDKLSKSAHAKSQDMKDKNYFDHQSPTYGSPFDMMKSFGITYKTAGENIAKGQPTPEAVVKAWMNSEGHRKNIMNPEF
TQIGVGYVESGNIWTQQFIGK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 28839; Mature: 28839

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAFLLSAAAAVSLITFGGIQQASAKELSCQHVVTVKKGNTVQHLTLQEAVEKLHMRTS
CCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
VKQLNVKNEKELTQLLQKHAKHSDMIVKDVQKETPAKTAPAAAEKPKADQNQQNQAADNA
HHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
KQTDNTNNSSEKTPSSVSAYEKKVVELTNAERQKQGLKPLQIDDKLSKSAHAKSQDMKDK
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
NYFDHQSPTYGSPFDMMKSFGITYKTAGENIAKGQPTPEAVVKAWMNSEGHRKNIMNPEF
CCCCCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCH
TQIGVGYVESGNIWTQQFIGK
HHHCCCEEECCCCHHHHHHCC
>Mature Secondary Structure
MKKAFLLSAAAAVSLITFGGIQQASAKELSCQHVVTVKKGNTVQHLTLQEAVEKLHMRTS
CCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
VKQLNVKNEKELTQLLQKHAKHSDMIVKDVQKETPAKTAPAAAEKPKADQNQQNQAADNA
HHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
KQTDNTNNSSEKTPSSVSAYEKKVVELTNAERQKQGLKPLQIDDKLSKSAHAKSQDMKDK
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
NYFDHQSPTYGSPFDMMKSFGITYKTAGENIAKGQPTPEAVVKAWMNSEGHRKNIMNPEF
CCCCCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCH
TQIGVGYVESGNIWTQQFIGK
HHHCCCEEECCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]