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The map label for this gene is sspD [H]

Identifier: 154685757

GI number: 154685757

Start: 1286265

End: 1286459

Strand: Reverse

Name: sspD [H]

Synonym: RBAM_013240

Alternate gene names: 154685757

Gene position: 1286459-1286265 (Counterclockwise)

Preceding gene: 154685758

Following gene: 154685752

Centisome position: 32.83

GC content: 46.15

Gene sequence:

>195_bases
ATGGCGAGCAGAAATAAACTCTTAGTTCCAGGGGCTGAGCAGGCACTTGACCAATTTAAATACGAAGTGGCTCAAGAATT
CGGCGTGAACCTTAGCTCTGATACAGCAGCACGCGCAAACGGCTCTGTAGGCGGGGAAATGACAAAACGTCTTGTACAGC
AGGCTCAATCACAATTAAACGGGAAAAATCAATAA

Upstream 100 bases:

>100_bases
GGTTTTTTTGCTGTACAACAATTGCCAGCATAATCAATACCGTTCCGTTTGAAACTAAAATGCGAAAACACATCTTGCCA
GAGAAAAGGAGATGAAAAAG

Downstream 100 bases:

>100_bases
TGCAGCTTATTCGCCGGGACTTCTCGGCGAATTTTGATATTTATCAGCATTCTCCTTTCCGTGCCGGTAGCCGTTCGGAT
TCCTTCGGTCTGATGAATCT

Product: SspD

Products: NA

Alternate protein names: SASP [H]

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MASRNKLLVPGAEQALDQFKYEVAQEFGVNLSSDTAARANGSVGGEMTKRLVQQAQSQLNGKNQ

Sequences:

>Translated_64_residues
MASRNKLLVPGAEQALDQFKYEVAQEFGVNLSSDTAARANGSVGGEMTKRLVQQAQSQLNGKNQ
>Mature_63_residues
ASRNKLLVPGAEQALDQFKYEVAQEFGVNLSSDTAARANGSVGGEMTKRLVQQAQSQLNGKNQ

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 6882; Mature: 6751

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00304 SASP_1 ; PS00684 SASP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRNKLLVPGAEQALDQFKYEVAQEFGVNLSSDTAARANGSVGGEMTKRLVQQAQSQLN
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
GKNQ
CCCC
>Mature Secondary Structure 
ASRNKLLVPGAEQALDQFKYEVAQEFGVNLSSDTAARANGSVGGEMTKRLVQQAQSQLN
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
GKNQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3009398; 9384377; 9852018 [H]