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The map label for this gene is ohrR [H]

Identifier: 154685729

GI number: 154685729

Start: 1258595

End: 1259104

Strand: Reverse

Name: ohrR [H]

Synonym: RBAM_012960

Alternate gene names: 154685729

Gene position: 1259104-1258595 (Counterclockwise)

Preceding gene: 154685734

Following gene: 154685720

Centisome position: 32.13

GC content: 45.88

Gene sequence:

>510_bases
ATGGACTGTTTTTCGGCTACAATAGGGGTAACGTTAACAAACAAAGAGTTGGTGAAAGAAGTAATGGCAGAAAAAGATTT
TGAACATATGAAACTGGAGAATCAGCTTTGTTTTTTGCTGTACGCAAGCTCAAGAGAAATGACGAAACGGTACAAACCGC
TGCTTGATAAGCTCAACGTAACTTATCCCCAATATTTGGCGCTGCTTTTATTATGGGAGCACGAAGAACTGAATGTGAAA
CGGATGGGTGAGCTTTTGTACCTGGATTCCGGAACGCTGACACCGATGCTGAAACGGATGGAGCAGCACGGAATCATCAT
GAGAAAGCGGTCGGCTGAAGACGAGCGATCCGTGACGATCAGGCTCACAGATGAAGGACGGGCCTTGCAGAAGACAGCGG
CGGATATCCCCATTGCCATGCTGGAACAGACGGGACGGTCAAAAGAGGAATTAAAGCAGTTAAAGCAGTCGCTTTATGAG
GTTTTGAATACGCTGCACGGCAAAAAATAA

Upstream 100 bases:

>100_bases
GGTCGCTTTTGAAGTAAATAATGCCATTATTATCAGCCTCCTCATTGTACTTACTGTATATATTGCCCCTGCTCATATTT
TTAAACATGAGGAATAGGAA

Downstream 100 bases:

>100_bases
GGATGCCCCGAATGGGCATCCTTATTTTTATTCTGCTGCCAGAAGCTTCACTTCAATATTTCCCGCTGTCGCTTTTGAAT
AAGGGCAGACACCGTGCGCT

Product: OhrR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDCFSATIGVTLTNKELVKEVMAEKDFEHMKLENQLCFLLYASSREMTKRYKPLLDKLNVTYPQYLALLLLWEHEELNVK
RMGELLYLDSGTLTPMLKRMEQHGIIMRKRSAEDERSVTIRLTDEGRALQKTAADIPIAMLEQTGRSKEELKQLKQSLYE
VLNTLHGKK

Sequences:

>Translated_169_residues
MDCFSATIGVTLTNKELVKEVMAEKDFEHMKLENQLCFLLYASSREMTKRYKPLLDKLNVTYPQYLALLLLWEHEELNVK
RMGELLYLDSGTLTPMLKRMEQHGIIMRKRSAEDERSVTIRLTDEGRALQKTAADIPIAMLEQTGRSKEELKQLKQSLYE
VLNTLHGKK
>Mature_169_residues
MDCFSATIGVTLTNKELVKEVMAEKDFEHMKLENQLCFLLYASSREMTKRYKPLLDKLNVTYPQYLALLLLWEHEELNVK
RMGELLYLDSGTLTPMLKRMEQHGIIMRKRSAEDERSVTIRLTDEGRALQKTAADIPIAMLEQTGRSKEELKQLKQSLYE
VLNTLHGKK

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 19649; Mature: 19649

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCFSATIGVTLTNKELVKEVMAEKDFEHMKLENQLCFLLYASSREMTKRYKPLLDKLNV
CCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCC
TYPQYLALLLLWEHEELNVKRMGELLYLDSGTLTPMLKRMEQHGIIMRKRSAEDERSVTI
CHHHHHHHHHHHCCCCCCHHHHCCEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCEEEE
RLTDEGRALQKTAADIPIAMLEQTGRSKEELKQLKQSLYEVLNTLHGKK
EECCCCCHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDCFSATIGVTLTNKELVKEVMAEKDFEHMKLENQLCFLLYASSREMTKRYKPLLDKLNV
CCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCC
TYPQYLALLLLWEHEELNVKRMGELLYLDSGTLTPMLKRMEQHGIIMRKRSAEDERSVTI
CHHHHHHHHHHHCCCCCCHHHHCCEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCEEEE
RLTDEGRALQKTAADIPIAMLEQTGRSKEELKQLKQSLYEVLNTLHGKK
EECCCCCHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]