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The map label for this gene is yitS [H]

Identifier: 154685542

GI number: 154685542

Start: 1088084

End: 1088935

Strand: Reverse

Name: yitS [H]

Synonym: RBAM_011080

Alternate gene names: 154685542

Gene position: 1088935-1088084 (Counterclockwise)

Preceding gene: 154685545

Following gene: 154685537

Centisome position: 27.79

GC content: 48.59

Gene sequence:

>852_bases
ATGACAGTTCACCTTATTGCTGACAGCGCCTCTGACCTGCCGAAATCTTATATTGAAGAAAACCGGATCGGGTTCATTCC
GCTGCACGTAACACTTGACGGAAACGAATATGAGGACACGGTCACCATTCAGGCGGATCATATATTTCAAGCGATGCGGG
ACGGGAAAGTTCCGAAAACATCCCAGGCATCACCGGATACGATAAAAAAAGTATTTTTACAATACGCGGAACTGGGAGAA
CCGGCGATATACATCGCCTTTTCCTCAGGTCTTTCCGGCACCTATCAGACGGCCGTAATGATCGCCAATGAAGTAAAAGA
GGAATTTCCCGATTTTGATTTACGGATTGTAGATTCCAAATGCGCTTCATTGGGCTGCGGCCTCGCGGTGATGCACGCGC
AAACACTCTGTGTTAACGGGAATACAATACAAGAAATCGAAACGTCTGTAAAGAGCTTTTGCGCACGGATGAAACATATA
TTTACGGTCGATGATGTCGCTTATCTCGCGCGGGGCGGCAGAATTTCAAAAACGTCCGCTTTTGTCGGGGGGCTTTTGAA
CATCAAACCGATTCTGCATGTGGATGACGGCAGGCTCGTGCCGCTCGAAAAATTGCGCGGACAAAAGAAACTGTTTAAAC
GGATTATAGAAAAGATGAAGGAAGAAGGCGGCGATTGGGCGGATCAAACCGTGGGGATCAGCTATGCAGATAACGAGGAG
ACGGCGCTTCGGATGAAGGAAATGATTGAAGAAGCGTTCCATCCGAAAGAGATCATTCTTCATTCAATCGGCTCTGCGAT
CGGCGCGCACTCCGGGCCGGGCACGCTCGCGATTTTTTTCCTGAAGCCATAA

Upstream 100 bases:

>100_bases
TATTAGCTTTTCCCTTAAAATAAAGTTTTGAACACTATTTTGCCACATTTATATGATATAGTTGGCATCACTCTCACCAA
TCGGAAAGAAGGGAATTATG

Downstream 100 bases:

>100_bases
TTTCAATGCGGGCGGGCATCCTAACGGACAGAAGGGAGGCTTTGCCGCATGAAAGATGATGACAAAAAACCGTTGGACAA
TAACGCCGTAAACCAGAAAA

Product: YitS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTVHLIADSASDLPKSYIEENRIGFIPLHVTLDGNEYEDTVTIQADHIFQAMRDGKVPKTSQASPDTIKKVFLQYAELGE
PAIYIAFSSGLSGTYQTAVMIANEVKEEFPDFDLRIVDSKCASLGCGLAVMHAQTLCVNGNTIQEIETSVKSFCARMKHI
FTVDDVAYLARGGRISKTSAFVGGLLNIKPILHVDDGRLVPLEKLRGQKKLFKRIIEKMKEEGGDWADQTVGISYADNEE
TALRMKEMIEEAFHPKEIILHSIGSAIGAHSGPGTLAIFFLKP

Sequences:

>Translated_283_residues
MTVHLIADSASDLPKSYIEENRIGFIPLHVTLDGNEYEDTVTIQADHIFQAMRDGKVPKTSQASPDTIKKVFLQYAELGE
PAIYIAFSSGLSGTYQTAVMIANEVKEEFPDFDLRIVDSKCASLGCGLAVMHAQTLCVNGNTIQEIETSVKSFCARMKHI
FTVDDVAYLARGGRISKTSAFVGGLLNIKPILHVDDGRLVPLEKLRGQKKLFKRIIEKMKEEGGDWADQTVGISYADNEE
TALRMKEMIEEAFHPKEIILHSIGSAIGAHSGPGTLAIFFLKP
>Mature_282_residues
TVHLIADSASDLPKSYIEENRIGFIPLHVTLDGNEYEDTVTIQADHIFQAMRDGKVPKTSQASPDTIKKVFLQYAELGEP
AIYIAFSSGLSGTYQTAVMIANEVKEEFPDFDLRIVDSKCASLGCGLAVMHAQTLCVNGNTIQEIETSVKSFCARMKHIF
TVDDVAYLARGGRISKTSAFVGGLLNIKPILHVDDGRLVPLEKLRGQKKLFKRIIEKMKEEGGDWADQTVGISYADNEET
ALRMKEMIEEAFHPKEIILHSIGSAIGAHSGPGTLAIFFLKP

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31146; Mature: 31015

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVHLIADSASDLPKSYIEENRIGFIPLHVTLDGNEYEDTVTIQADHIFQAMRDGKVPKT
CEEEEEECCCHHCCHHHHHCCCEEEEEEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCC
SQASPDTIKKVFLQYAELGEPAIYIAFSSGLSGTYQTAVMIANEVKEEFPDFDLRIVDSK
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCH
CASLGCGLAVMHAQTLCVNGNTIQEIETSVKSFCARMKHIFTVDDVAYLARGGRISKTSA
HHHHCCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHH
FVGGLLNIKPILHVDDGRLVPLEKLRGQKKLFKRIIEKMKEEGGDWADQTVGISYADNEE
HHHHHCCCCEEEEECCCCEECHHHHCCHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCHH
TALRMKEMIEEAFHPKEIILHSIGSAIGAHSGPGTLAIFFLKP
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TVHLIADSASDLPKSYIEENRIGFIPLHVTLDGNEYEDTVTIQADHIFQAMRDGKVPKT
EEEEEECCCHHCCHHHHHCCCEEEEEEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCC
SQASPDTIKKVFLQYAELGEPAIYIAFSSGLSGTYQTAVMIANEVKEEFPDFDLRIVDSK
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCH
CASLGCGLAVMHAQTLCVNGNTIQEIETSVKSFCARMKHIFTVDDVAYLARGGRISKTSA
HHHHCCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHH
FVGGLLNIKPILHVDDGRLVPLEKLRGQKKLFKRIIEKMKEEGGDWADQTVGISYADNEE
HHHHHCCCCEEEEECCCCEECHHHHCCHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCHH
TALRMKEMIEEAFHPKEIILHSIGSAIGAHSGPGTLAIFFLKP
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9025291; 9353931; 9384377 [H]