Click here to switch to the map view.

The map label for this gene is yisX [H]

Identifier: 154685534

GI number: 154685534

Start: 1078701

End: 1079327

Strand: Reverse

Name: yisX [H]

Synonym: RBAM_011000

Alternate gene names: 154685534

Gene position: 1079327-1078701 (Counterclockwise)

Preceding gene: 154685535

Following gene: 154685533

Centisome position: 27.54

GC content: 47.69

Gene sequence:

>627_bases
ATGAATACGATCCAAAAACCGAAAATCCCGAAAGAATTGCCGGTGCTTTCTTTCACAGAAGCGCTTCAGGACGACCTCAT
AAAAGAAGTCGTCATAGAAAACGCCGTCGTAAGCGGCAAACTGGACGGCCTGCGCGCCGAAAAAGTCATTTTCAGAAACA
CCGTTTTTACGGATGTCTCTTTCAGACATATGGAATGTACGGATGTCCTGTTTGACAAATGTGATGTCTCAAACGCTGAT
TTCAGCGGAAGCATCATCCATAGAACGGCGTTTCAGCATTCAAAACTTCTCGGCTTGAACCTGGCGGATTCCGCCATGCG
TCATGTACGGTTTGAAGACTGCCTCGCAAATTACAGCTCCTTCAGCTATTCCAATATGAAGCATGTCCGGTTTGACACGT
GCGCTCTTACAGAAAGTGAGTGGAATGATGCCGTTCTTGAATACACAGATCTTGACGTCTGTGATTTGAACGGCGCAAAC
TTCATCGGCACGTCTCTTTTTAATATGGATATCAGCACGTGCACATTTGATCACCTGCACGTCTCACTTGAGAAGCTGAA
AGGATGCCGCATCTCTCCGGCGCATGCCGTGACATTCGCAGAAGCGCTCGGAGCCATTGTGACGTGA

Upstream 100 bases:

>100_bases
TAATACCCTTTGTACATTACGCAACAGCAAGGATGGCAGGCAGAAAACGATATCTGTCAATTGCCGTTTTCAGCTATTAA
TTCAGAAAAGGAAGTATGAG

Downstream 100 bases:

>100_bases
TCTTTTATTAAACGAAACGGCGGTCGGCATCCTGAATAAATGCTCGGCATTGGTGATGTGGGGTGCTGCTTTTTATTTTG
CGGCGCTTTTGTTTCGATAA

Product: YisX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNTIQKPKIPKELPVLSFTEALQDDLIKEVVIENAVVSGKLDGLRAEKVIFRNTVFTDVSFRHMECTDVLFDKCDVSNAD
FSGSIIHRTAFQHSKLLGLNLADSAMRHVRFEDCLANYSSFSYSNMKHVRFDTCALTESEWNDAVLEYTDLDVCDLNGAN
FIGTSLFNMDISTCTFDHLHVSLEKLKGCRISPAHAVTFAEALGAIVT

Sequences:

>Translated_208_residues
MNTIQKPKIPKELPVLSFTEALQDDLIKEVVIENAVVSGKLDGLRAEKVIFRNTVFTDVSFRHMECTDVLFDKCDVSNAD
FSGSIIHRTAFQHSKLLGLNLADSAMRHVRFEDCLANYSSFSYSNMKHVRFDTCALTESEWNDAVLEYTDLDVCDLNGAN
FIGTSLFNMDISTCTFDHLHVSLEKLKGCRISPAHAVTFAEALGAIVT
>Mature_208_residues
MNTIQKPKIPKELPVLSFTEALQDDLIKEVVIENAVVSGKLDGLRAEKVIFRNTVFTDVSFRHMECTDVLFDKCDVSNAD
FSGSIIHRTAFQHSKLLGLNLADSAMRHVRFEDCLANYSSFSYSNMKHVRFDTCALTESEWNDAVLEYTDLDVCDLNGAN
FIGTSLFNMDISTCTFDHLHVSLEKLKGCRISPAHAVTFAEALGAIVT

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646
- InterPro:   IPR012334 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 23219; Mature: 23219

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIQKPKIPKELPVLSFTEALQDDLIKEVVIENAVVSGKLDGLRAEKVIFRNTVFTDVS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCC
FRHMECTDVLFDKCDVSNADFSGSIIHRTAFQHSKLLGLNLADSAMRHVRFEDCLANYSS
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCC
FSYSNMKHVRFDTCALTESEWNDAVLEYTDLDVCDLNGANFIGTSLFNMDISTCTFDHLH
CCCCCCCEEEEEEEECCCCCCCCCEEEECCCCEEECCCCCCHHHHHEECCCCCEEHHHHH
VSLEKLKGCRISPAHAVTFAEALGAIVT
HHHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTIQKPKIPKELPVLSFTEALQDDLIKEVVIENAVVSGKLDGLRAEKVIFRNTVFTDVS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCC
FRHMECTDVLFDKCDVSNADFSGSIIHRTAFQHSKLLGLNLADSAMRHVRFEDCLANYSS
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCC
FSYSNMKHVRFDTCALTESEWNDAVLEYTDLDVCDLNGANFIGTSLFNMDISTCTFDHLH
CCCCCCCEEEEEEEECCCCCCCCCEEEECCCCEEECCCCCCHHHHHEECCCCCEEHHHHH
VSLEKLKGCRISPAHAVTFAEALGAIVT
HHHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]