| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is yhjD [H]
Identifier: 154685503
GI number: 154685503
Start: 1047011
End: 1047370
Strand: Reverse
Name: yhjD [H]
Synonym: RBAM_010690
Alternate gene names: 154685503
Gene position: 1047370-1047011 (Counterclockwise)
Preceding gene: 154685508
Following gene: 154685502
Centisome position: 26.73
GC content: 42.78
Gene sequence:
>360_bases ATGCCTGACATCCGGAGCGGCACCCGCGATCTCATCGAAAAAGGGCTGTTTCTGCCCATGGCGGCTGCCATCCTGAACCG GGACCTCGAAGCGCTTGATTCGTGCCCGTTCAAATTAAAACAACCCTATAAACAGCTTATCAGCTGCTCTTTAAAATTAG CACAAAAGGATTTGAGTGATGTTCGAAAAGAGTTAAGAAAGCGTAAAATTAAAATATACGAAGCGGAAAGAGACGAAGCA TTTACGCTTTATATATGCACCATTAACGGCTATGAAGAAAAACACCGTTATTTCAACCCGAGAATAAGGGAACAGGTAAC TGCCTTATTAGAATATTACCTGTCTCTTGCGACCATTTAA
Upstream 100 bases:
>100_bases AAAAACGAAAATGTTTACGAGATTTTCCGACTTGAAATATCGTGTAAGCGAGTATAAAATAAGAACAAAGGTTCTCTTTT TTAAGAAAGAAGGAGTATTT
Downstream 100 bases:
>100_bases AAAGCAGACGGGACTGCTTTTCCTTTTCAGCTGATAAATTTCAGACTATTCACACTATACATTCGACATGATTTTCTTTA TAATCGGGACACGCTGTTTT
Product: YhjD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MPDIRSGTRDLIEKGLFLPMAAAILNRDLEALDSCPFKLKQPYKQLISCSLKLAQKDLSDVRKELRKRKIKIYEAERDEA FTLYICTINGYEEKHRYFNPRIREQVTALLEYYLSLATI
Sequences:
>Translated_119_residues MPDIRSGTRDLIEKGLFLPMAAAILNRDLEALDSCPFKLKQPYKQLISCSLKLAQKDLSDVRKELRKRKIKIYEAERDEA FTLYICTINGYEEKHRYFNPRIREQVTALLEYYLSLATI >Mature_118_residues PDIRSGTRDLIEKGLFLPMAAAILNRDLEALDSCPFKLKQPYKQLISCSLKLAQKDLSDVRKELRKRKIKIYEAERDEAF TLYICTINGYEEKHRYFNPRIREQVTALLEYYLSLATI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13959; Mature: 13828
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDIRSGTRDLIEKGLFLPMAAAILNRDLEALDSCPFKLKQPYKQLISCSLKLAQKDLSD CCCCCCCHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VRKELRKRKIKIYEAERDEAFTLYICTINGYEEKHRYFNPRIREQVTALLEYYLSLATI HHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDIRSGTRDLIEKGLFLPMAAAILNRDLEALDSCPFKLKQPYKQLISCSLKLAQKDLSD CCCCCCHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VRKELRKRKIKIYEAERDEAFTLYICTINGYEEKHRYFNPRIREQVTALLEYYLSLATI HHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]