Click here to switch to the map view.

The map label for this gene is yhjB [H]

Identifier: 154685501

GI number: 154685501

Start: 1045224

End: 1046693

Strand: Reverse

Name: yhjB [H]

Synonym: RBAM_010670

Alternate gene names: 154685501

Gene position: 1046693-1045224 (Counterclockwise)

Preceding gene: 154685502

Following gene: 154685500

Centisome position: 26.71

GC content: 50.61

Gene sequence:

>1470_bases
ATGAACGCAGCATTTCCCGTAATGGCCGCCGTGCTCCTGTTTTGTGTATATCTCGGAATCCGGGCCCGAAAAGGAAAACA
TATGGACCTTGAACAATGGACGGTGGGCGGACGCGGCTTCGGCACGATGTTTGTCTTTTTATTAATGGCGGGAGAAATAT
ACACGACCTTTACATTCCTCGGCGGAAGCGGATGGGCTTACGGAAAAGGAGGCCCCGCCTTTTATATTATCGCGTACGGC
TGCCTTGCCTACATTTTGTCATATTGGCTTCTGCCAGCCGTGTGGACTTACGCCAAACAACACAAACTGATGTCGCAATC
AGATTTTTTTATTTCAAAATACAACAGCTCGCTCCTCGGCATTCTCGTATCGCTCGTCGGCATCGCATCCCTCATACCCT
ATCTCGTCCTGCAGCTGAAAGGGCTCGGATTAATTGTTTCAGCAACGTCATACGGACAGATTCCGCCCTCAGCCGCTGTC
TGGATCGGCGCTGTTTCCATCACGATTTATGTGATGATATCAGGAATCCACGGTTCAGCGTGGATATCAGTCGTTAAAGA
TATCATGATTTTAGGCATCGTCCTGTATTTAGGCATTTATCTGCCCATTCATTACTATGGCGGATTTACGGAGATGTTCA
AACAAATTGACGCCGCAAAACCCGGTTTTCTCACGCTGCCGGAAACCGGACAGAGCGTTTCCTGGTTCAGCTCAACGGTT
TTGCTGACCGCCCTCGGCTTTTATATGTGGCCCCATACATTTGCCGCTTCCTATTCGGCGGAGCATCCGCGGGTGTTTCG
GAAAAACGCAATCATCATGCCTCTTTATCAGCTCGTCCTGCTGTTTGTCATCTTTACCGGATTTGCGGCGATTCTGCAGG
TGCCCGGTTTAAAAGGGGCGGACACGGATCTCGCCTTATTAAAGCTGTCTGTGAAAACCTTTGATCCCTGGTTTGTCGGA
CTGATCGGATCGGCGGGCATCCTGACGGCGCTTGTACCCGGTTCAATGATATTAATGGCCTCAAGCACGCTGTTCGCCAA
AAATGTGTACAAAGCCATTCTGCCCGGCACGACTGACGAAAAAGTCTCACGGCTCGCAAAATACGCCGTACCCGTCATCG
CGCTGATATCCGTATATTTTACGCTGAAAGGCGGAAATACCATCGTCACCTTGCTTTTAATGGGCTACAGCCTTGTCACC
CAGCTTTTCCCCGCCCTCTTATTCAGCCTGCCGAAGCGGCGTTTCATCACAAGCCACGGCGCTTTTGCCGGCATAACGGC
CGGGGTCGGAACGGTGGCTTTCATTACGCTGACCGAATCAACCATCGGAACCCTCTTTCCGTTTCTTCCGCAGATCGTTA
AGGATATGAATACAGGCATCATCGCACTGGTTCTGAACATTGCCGTCATGTTTGCAGTCAGCGCCGCAGTCAGAAAAAAA
CAAATCAGCGCAGCCGAAAAGGCGGCTTAA

Upstream 100 bases:

>100_bases
CTTTCATTCTCGCGTATGTCGTCATCTGGGCGGTGCTGACTTCCGTTCTGATGGCCGCCGTTTACAAATTGGACAAAGAA
AACAAGGCGGGTGAGGCGGA

Downstream 100 bases:

>100_bases
ATGGTAAGATAGCGGTAAGATACACGAAAGGGGAAAAACGCATGATCATGACAACGACCGAAACCATCGCCGGAAAACAG
ATTACGGAAGTGAAAGGCTT

Product: YhjB

Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MNAAFPVMAAVLLFCVYLGIRARKGKHMDLEQWTVGGRGFGTMFVFLLMAGEIYTTFTFLGGSGWAYGKGGPAFYIIAYG
CLAYILSYWLLPAVWTYAKQHKLMSQSDFFISKYNSSLLGILVSLVGIASLIPYLVLQLKGLGLIVSATSYGQIPPSAAV
WIGAVSITIYVMISGIHGSAWISVVKDIMILGIVLYLGIYLPIHYYGGFTEMFKQIDAAKPGFLTLPETGQSVSWFSSTV
LLTALGFYMWPHTFAASYSAEHPRVFRKNAIIMPLYQLVLLFVIFTGFAAILQVPGLKGADTDLALLKLSVKTFDPWFVG
LIGSAGILTALVPGSMILMASSTLFAKNVYKAILPGTTDEKVSRLAKYAVPVIALISVYFTLKGGNTIVTLLLMGYSLVT
QLFPALLFSLPKRRFITSHGAFAGITAGVGTVAFITLTESTIGTLFPFLPQIVKDMNTGIIALVLNIAVMFAVSAAVRKK
QISAAEKAA

Sequences:

>Translated_489_residues
MNAAFPVMAAVLLFCVYLGIRARKGKHMDLEQWTVGGRGFGTMFVFLLMAGEIYTTFTFLGGSGWAYGKGGPAFYIIAYG
CLAYILSYWLLPAVWTYAKQHKLMSQSDFFISKYNSSLLGILVSLVGIASLIPYLVLQLKGLGLIVSATSYGQIPPSAAV
WIGAVSITIYVMISGIHGSAWISVVKDIMILGIVLYLGIYLPIHYYGGFTEMFKQIDAAKPGFLTLPETGQSVSWFSSTV
LLTALGFYMWPHTFAASYSAEHPRVFRKNAIIMPLYQLVLLFVIFTGFAAILQVPGLKGADTDLALLKLSVKTFDPWFVG
LIGSAGILTALVPGSMILMASSTLFAKNVYKAILPGTTDEKVSRLAKYAVPVIALISVYFTLKGGNTIVTLLLMGYSLVT
QLFPALLFSLPKRRFITSHGAFAGITAGVGTVAFITLTESTIGTLFPFLPQIVKDMNTGIIALVLNIAVMFAVSAAVRKK
QISAAEKAA
>Mature_489_residues
MNAAFPVMAAVLLFCVYLGIRARKGKHMDLEQWTVGGRGFGTMFVFLLMAGEIYTTFTFLGGSGWAYGKGGPAFYIIAYG
CLAYILSYWLLPAVWTYAKQHKLMSQSDFFISKYNSSLLGILVSLVGIASLIPYLVLQLKGLGLIVSATSYGQIPPSAAV
WIGAVSITIYVMISGIHGSAWISVVKDIMILGIVLYLGIYLPIHYYGGFTEMFKQIDAAKPGFLTLPETGQSVSWFSSTV
LLTALGFYMWPHTFAASYSAEHPRVFRKNAIIMPLYQLVLLFVIFTGFAAILQVPGLKGADTDLALLKLSVKTFDPWFVG
LIGSAGILTALVPGSMILMASSTLFAKNVYKAILPGTTDEKVSRLAKYAVPVIALISVYFTLKGGNTIVTLLLMGYSLVT
QLFPALLFSLPKRRFITSHGAFAGITAGVGTVAFITLTESTIGTLFPFLPQIVKDMNTGIIALVLNIAVMFAVSAAVRKK
QISAAEKAA

Specific function: Catalyzes The Sodium-Dependent Uptake Of Extracellular Pantothenate. [C]

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI87082237, Length=355, Percent_Identity=23.0985915492958, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 52844; Mature: 52844

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAFPVMAAVLLFCVYLGIRARKGKHMDLEQWTVGGRGFGTMFVFLLMAGEIYTTFTFL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCHHHHHHEEE
GGSGWAYGKGGPAFYIIAYGCLAYILSYWLLPAVWTYAKQHKLMSQSDFFISKYNSSLLG
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHH
ILVSLVGIASLIPYLVLQLKGLGLIVSATSYGQIPPSAAVWIGAVSITIYVMISGIHGSA
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCHHH
WISVVKDIMILGIVLYLGIYLPIHYYGGFTEMFKQIDAAKPGFLTLPETGQSVSWFSSTV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHH
LLTALGFYMWPHTFAASYSAEHPRVFRKNAIIMPLYQLVLLFVIFTGFAAILQVPGLKGA
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DTDLALLKLSVKTFDPWFVGLIGSAGILTALVPGSMILMASSTLFAKNVYKAILPGTTDE
CCCHHHHEEEHHHCCHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCHH
KVSRLAKYAVPVIALISVYFTLKGGNTIVTLLLMGYSLVTQLFPALLFSLPKRRFITSHG
HHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
AFAGITAGVGTVAFITLTESTIGTLFPFLPQIVKDMNTGIIALVLNIAVMFAVSAAVRKK
CHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QISAAEKAA
HHHHHHCCC
>Mature Secondary Structure
MNAAFPVMAAVLLFCVYLGIRARKGKHMDLEQWTVGGRGFGTMFVFLLMAGEIYTTFTFL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCHHHHHHEEE
GGSGWAYGKGGPAFYIIAYGCLAYILSYWLLPAVWTYAKQHKLMSQSDFFISKYNSSLLG
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHH
ILVSLVGIASLIPYLVLQLKGLGLIVSATSYGQIPPSAAVWIGAVSITIYVMISGIHGSA
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCHHH
WISVVKDIMILGIVLYLGIYLPIHYYGGFTEMFKQIDAAKPGFLTLPETGQSVSWFSSTV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHH
LLTALGFYMWPHTFAASYSAEHPRVFRKNAIIMPLYQLVLLFVIFTGFAAILQVPGLKGA
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DTDLALLKLSVKTFDPWFVGLIGSAGILTALVPGSMILMASSTLFAKNVYKAILPGTTDE
CCCHHHHEEEHHHCCHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCHH
KVSRLAKYAVPVIALISVYFTLKGGNTIVTLLLMGYSLVTQLFPALLFSLPKRRFITSHG
HHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
AFAGITAGVGTVAFITLTESTIGTLFPFLPQIVKDMNTGIIALVLNIAVMFAVSAAVRKK
CHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QISAAEKAA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]